Gene Dtox_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1613 
Symbol 
ID8428577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1693826 
End bp1695082 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content40% 
IMG OID645033945 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003191094 
Protein GI258514872 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000260989 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG AAGGTATTGC AGTAAATTTT AAAAACACCT TCCCTGCCCT GGCCAATGAA 
AATTTCCGCT ATTTCTGGCT CGGCCAGTGT ATTTCGTTTC TGGGTACATG GATGCAGCGG
GCGGCTCAAC AGTGGTTAGT ATATACAATA ACAAAATCAG CCTTATTACT GGGAGTTTTG
GGTGTAGCAC AATTTTCACC TATTCTATTA TTTTCACTCT TTGCCGGTGT GTTTGTCGAC
AGGTACCCCA AGAAAAAAAT TATTCTAATC ACACAAACAG CCCTAATGCT GCAATCTTTT
TTATTGGCTT TATTGGTATG GACAGGGCAT GTCAGGTACT GGCAAGTTTT ATTTCTGGCC
ACAATAATGG GATTGGCCAA CACGCTGGAT ATGCCGGCCA GACAGTCATT CTTTATCGAT
CTTGTGGGAA AAAAGGACCT AACTAACGCT ATTGCTTTAA ATTCTGCTAT AGTTAACCTA
GCCAGAATAA CCGGTCCGAC AATAGCCGCA TTATTAATGG CTAATTTTGG CGCCAGCTTC
TGCTTTTTAT TTAATGCCGT CAGTTTTATA CCTGCAATAA TAGGTCTGAA TCTGGCAAAG
CCAATAACAA ACGACAGTAA TAGTATTCCT AAAAAACAAG AGAATGTGTT TGCCAGTATC
ATTGAGGGTC TTAAATACAT TTTATCTAAG CCGATATTAT TAATCGCAGT TGCGGTCATG
CTGGCAGTAG GCACCTTTGC CATGAATATG GAAGTTATCT TTCCCGTTTT TGCTGATAAG
GCCCTGCATA AAGGGGTGCA CGGATATGGT TTTCTTTTAT CTGCCAACGG TTTAGGCTCA
CTTGCAGGCT CATTTTGGAT GGCAGCTAGA TCTAAAATGG GACCCAGTAT AAAATACTTA
TTTATTAGTT CTCTTATACT ATCACTTTTA CTCATAACAA TAAACTTCAT CCACTTCTAT
ATATTGACAC TAATTATTAG CGCAGTATTA GGTTTTTCCA GTATTATTTT CATGATGACA
GTTAACTCTA CTATCCAGCT AAACACAAAC AACCGCTACC GGGGTCGAAT CATGAGCGTT
TACACACTGG CTTTTGCCGG AACAACTCCC TTAGGCAATC TTTTCGCCGG AAGTATCACA
GAGAAATACG GGCCGGGAAT TGGTTTTTTG ATGTGCGGCG CAGTTACGGG CATACTGGTT
CTGTTTATTA TGATCATAAG CCTTATCGGA TTGAAAAGGG ATCAGTTGGA AGATTGA
 
Protein sequence
MIKEGIAVNF KNTFPALANE NFRYFWLGQC ISFLGTWMQR AAQQWLVYTI TKSALLLGVL 
GVAQFSPILL FSLFAGVFVD RYPKKKIILI TQTALMLQSF LLALLVWTGH VRYWQVLFLA
TIMGLANTLD MPARQSFFID LVGKKDLTNA IALNSAIVNL ARITGPTIAA LLMANFGASF
CFLFNAVSFI PAIIGLNLAK PITNDSNSIP KKQENVFASI IEGLKYILSK PILLIAVAVM
LAVGTFAMNM EVIFPVFADK ALHKGVHGYG FLLSANGLGS LAGSFWMAAR SKMGPSIKYL
FISSLILSLL LITINFIHFY ILTLIISAVL GFSSIIFMMT VNSTIQLNTN NRYRGRIMSV
YTLAFAGTTP LGNLFAGSIT EKYGPGIGFL MCGAVTGILV LFIMIISLIG LKRDQLED