| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1434 |
|---|
| Symbol | |
|---|
| ID | 8428389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 1487349 |
|---|
| End bp | 1488377 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645033770 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003190928 |
|---|
| Protein GI | 258514706 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA GCAACAGTAA TCTGTTTTTC TCAATGACCT ATGAGTTTCT TGACATATAT
ATGGTAAAGC AAGTGGGACG GAGTCCTGAC ACGATAGAGT CTTACAGGGA TGCTCTGACT
ATTTTTCGCA GATACGTGCT GAACGAGCTC AATATATCCA TAACTAAATT TACATTTGCA
CAGTGTACGC GGAACTGCAT TTTCGGGTTC CTTGAATATT TGGCAGCTCA AGGGAATAAG
CCCGGCACAC GTAACCAACG CCTGGCGGCG CTCAAATCCT ATCTATGGTT TGCAGCAGAC
AAAGATGTGA CCCTGCAATC CATCGCTCTT GAGCTAAGCC GTATTCCCCA ATTAAAAAAC
CCTGTGACTG AGAAATTCGT ACTTTCTGAG GAAGCCCTAA ATGCCATTTT TATCCAACCA
GCCAGTAGCC GTATGGGATT AAGGGACCGA ACTATTATGA TCTTATTATA CGACAGCGCT
GTCAGGCTTG CGGAGATATT GAACCTTCGG GTAAATGATA TCTGCTTGAA CCAAGATAAT
CCCTACATCC GTGTTATGGG TAAGGGCAGC AAGGAGCGCG TTGTTGCAAT TAACATCAAA
ACCGTGAAAC ACGTTAATCA ATATCTTGAT GTTTATCGCT CAAGGGACAA CCCGGATAGC
AATCTGCTTT TCTATACAGT CATTAAAGGC AGAGCCGGGA AAATGTCGGA GGGTAACGTG
GAACGGTTCA TACAGCAGTA TGCTGACAAA GCTAGAGAAT CTTGTCCGGA TATACCGCTA
CGTGTATATC CCCATATGCT GCGGCGAACA AGGGCTACAA ATCTGTACCA GAACGGAATT
GAGCTTGCAC TTATCTCCAG GATACTGGGC CACGCCTTTC TCGATACTAC ACGGGTCTAT
TACGCAAAGC CTTCCTTAGC CATGATGCGC GAAGCGATGG ATTCTGTTGA AGCTCCCCAG
ACGAGAGAAG AAAAACCGCT TTGGGTTGGC TCTGAAGAGG AAATGGCTAA GCTATGTGGT
CTTAGGTGA
|
|---|
| Protein sequence | MKNSNSNLFF SMTYEFLDIY MVKQVGRSPD TIESYRDALT IFRRYVLNEL NISITKFTFA
QCTRNCIFGF LEYLAAQGNK PGTRNQRLAA LKSYLWFAAD KDVTLQSIAL ELSRIPQLKN
PVTEKFVLSE EALNAIFIQP ASSRMGLRDR TIMILLYDSA VRLAEILNLR VNDICLNQDN
PYIRVMGKGS KERVVAINIK TVKHVNQYLD VYRSRDNPDS NLLFYTVIKG RAGKMSEGNV
ERFIQQYADK ARESCPDIPL RVYPHMLRRT RATNLYQNGI ELALISRILG HAFLDTTRVY
YAKPSLAMMR EAMDSVEAPQ TREEKPLWVG SEEEMAKLCG LR
|
|---|
| |