Gene Dtox_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1089 
SymbolileS 
ID8428028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1112925 
End bp1115708 
Gene Length2784 bp 
Protein Length927 aa 
Translation table11 
GC content47% 
IMG OID645033424 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_003190598 
Protein GI258514376 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000209628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTACG GAAAGACAAT TAATTTGCCC CAGACTGATT TTCCCATGCG AGCAAATCTA 
CCCAACAGGG AACCGGAAAT TCTGAAGTAC TGGACAGAGA AAAACATCTA CCGGGCGGTA
CAGGAAAAGA ATGAGGGCAA ACCCAAATTT ATACTGCATG ACGGTCCCCC TTATGCCAAT
GGTGATATTC ACCTGGGACA CACATTAAAT AAAATCTTAA AAGATATTAT TGTTAAATAT
AAGTCGATGA CAGGTTATGA TGCTCCCTAT GTGCCGGGCT GGGATACACA TGGTTTGCCT
ATCGAGCAGC AGGCGATTAA AGCTCTGGGC ATTAACAGGC ATGAAGTGGA TACGGTAGTT
TTTCGCAATA AATGCAAGGA GTATGCTCTT AAATTCGTTG GAATTCAAAA GGAAGAGTTT
ATTCGCCTGG GTGTCAGGGC TGATTGGGAT CGTTCTTATG TAACCTTGAT GCCTCATTTT
GAGGCCAGAC AGATTGGCGT GTTCGGTGAA ATGGCCAAAC GGGGGTATAT TTATAAAGGT
CTTAAGCCGG TTTATTGGTG CGCCTCCTGT GAAACGGCAT TGGCTGAGGC AGAGGTTGAA
TATCAGGATA AAAAATCCCC GTCTATTTAT GTGCGCTTTC CGGTAGCGGA CAGCAAGGGG
TTATTTCCCT CCGAGAATAC CTATCTGGTT ATCTGGACAA CCACGCCATG GACTATTCCC
GGTAACGTGG CAATTTCCCT GCACCCCGAA TATTTCTACG TGTTGGTGCA GATAGGGGAA
GTAAAATATA TAGTAGCTAA AGAATTACTG GCTTCTTTTT TAGAATTGCT AGGTGCTCAA
GGGACTGTGT TACAGGAGTT TGCCGGTGCT GAACTGGAGA GAGTGGTATG CCGACATCCT
TTGCTGGATA GAGATTCACT GGTTATCTTG GGTGAACACG TAACCTTGGA GCAAGGTACA
GGTTGCGTCC ATACAGCACC GGGACACGGT CAGGAAGACT TTGAAGCAGC AAAAAAATAT
GGTTTGCCGG TCATTTCGCC TGTTAATGGA AAAGGAGTCT TTACTGACGA GGGTGGTATT
TTCAGCGGCC AGTTTTATCT CAAGGCTAAT CAAAGCGTTC TGGATGCGCT TACTGAGAGA
GGTCATTTGC TGTTTCAGGC TGAAATCGAT CACCAGTACC CTCATTGCTG GCGCTGCAAG
AGTTCAATTT TCTTTCGGGC TACTGAGCAG TGGTTTGCTT CTATTGAAGG TTTTCGGCGC
CAGGCATTGG AGGAAATTAG GAAGGTTCAG TGGGTTCCTG CCTGGGGCGA AGAGAGAATT
TACGGTATGG TAGAGAACCG GGGAGATTGG TGTATTTCAC GACAGCGTAC CTGGGGTGTG
CCCATTCCTA TTTTCTATTG CAGCAAGTGC GGTAAAGCTT TGATTAATGA CCGGACAATT
AAGCACCTAC AGGGGCTGTT CAAAGAGCAC GGTTCTGATG TTTGGTTTGC CAGGCAAACC
GCTGATTTGC TTCCCCCGGA CATTGCCTGT CCAGAGTGTT CAGCCGCTGA TTTTACTAAA
GAAACCGATA TTATGGATGT ATGGTTTGAT TCCGGTTCCA GTCACCTGGC TGTATTGGAT
GAGAAAACAG TTTGGCCCGA ATTGAGTTGG CCGGCGGATC TTTATTTGGA AGGCAGTGAC
CAGCACAGGG GTTGGTTTAA CTCTTCCCTG TCAACTTCTG TGGCTGTAAC AGGCCGGGCA
CCTTACCGGG CTGTATTGAC TCACGGTTTT TTGGTGGACG AAAAAGGACG TAAAATGTCC
AAATCACTGG GCAACGTGGT CGATCCTCTT AAAGTTATCC AGCAGCTGGG AGCGGATATT
TTAAGGCTCT GGGTTAGTTC AGCGGACTAT AAGAGCGACC TGGCTGTATC ACAAAACATT
TTAAAACAGC TCAGTGAGGC TTACCGTAAA ATCAGAAATA CCTGTCGTTT CTTATTAAGT
AATATTTATG ACTTTGACCC GTCTGCGGAC CAGGTGGCTT ATGAAAAAAT GGTTGAGCTG
GACCGCTGGG CCCTGCTTAA GCTGCACCGG CTGATCGAGA AGGTGTTGAA TGCTTATCAT
GATTACGAGT TCCATGTTGT CTACCATGCT ATCCATAATT TCTGCACGGT GGATATGAGC
AATCGCTACC TGGATATTAT CAAAGACCGC CTGTACACAT CTCCTGCTGA ATCGCCGGAC
CGAAGGGCCG CTCAGACAGT CCTTTATCTC ATACTGGATG CTCTGGTCAG ACTTCTTACT
CCTGTACTGG CCTTTACCAG TGAGGAAATC TGGAAACACA TGCCCAGAGT GGAGAGCAGG
CCTGAGAGTG TTCAACTGGC GGATATGCCC GTAGTAAATG AAGCTTATTT AGATCTGGAA
TTAGAGGATA AATGGCAGCG CATCATGGCA GTGCGTAACG AAGTCATCCG TATTTTAGAG
GGCGCGCGCC AGGAAAAAGT TATTGGCAAC TCCCTGGAGG CACAGGTTGA CCTTTATTGC
GAAAAAGAGT TACATGATTT TTTAGAACCC TTAAAAGATG ATTTAGCCGC TATATTTATT
GTATCTGTTG CTCGTTTGAG CAATGCCGGC TCGGAAGTGC CTGTCCATGC TGTTGGCTCG
GAAATTGTTT CAGGTTTGCA TGTAGCTGTG AGCAGGGCTC CGGGGGGCAA GTGTGAGAGA
TGCTGGATGT ATCATATTGC TGTTGGAAAT GACTTGGAGC ACCCTTCTCT TTGTCCGAGA
TGTGCCGGAG TTTTGAAAAA ATAA
 
Protein sequence
MDYGKTINLP QTDFPMRANL PNREPEILKY WTEKNIYRAV QEKNEGKPKF ILHDGPPYAN 
GDIHLGHTLN KILKDIIVKY KSMTGYDAPY VPGWDTHGLP IEQQAIKALG INRHEVDTVV
FRNKCKEYAL KFVGIQKEEF IRLGVRADWD RSYVTLMPHF EARQIGVFGE MAKRGYIYKG
LKPVYWCASC ETALAEAEVE YQDKKSPSIY VRFPVADSKG LFPSENTYLV IWTTTPWTIP
GNVAISLHPE YFYVLVQIGE VKYIVAKELL ASFLELLGAQ GTVLQEFAGA ELERVVCRHP
LLDRDSLVIL GEHVTLEQGT GCVHTAPGHG QEDFEAAKKY GLPVISPVNG KGVFTDEGGI
FSGQFYLKAN QSVLDALTER GHLLFQAEID HQYPHCWRCK SSIFFRATEQ WFASIEGFRR
QALEEIRKVQ WVPAWGEERI YGMVENRGDW CISRQRTWGV PIPIFYCSKC GKALINDRTI
KHLQGLFKEH GSDVWFARQT ADLLPPDIAC PECSAADFTK ETDIMDVWFD SGSSHLAVLD
EKTVWPELSW PADLYLEGSD QHRGWFNSSL STSVAVTGRA PYRAVLTHGF LVDEKGRKMS
KSLGNVVDPL KVIQQLGADI LRLWVSSADY KSDLAVSQNI LKQLSEAYRK IRNTCRFLLS
NIYDFDPSAD QVAYEKMVEL DRWALLKLHR LIEKVLNAYH DYEFHVVYHA IHNFCTVDMS
NRYLDIIKDR LYTSPAESPD RRAAQTVLYL ILDALVRLLT PVLAFTSEEI WKHMPRVESR
PESVQLADMP VVNEAYLDLE LEDKWQRIMA VRNEVIRILE GARQEKVIGN SLEAQVDLYC
EKELHDFLEP LKDDLAAIFI VSVARLSNAG SEVPVHAVGS EIVSGLHVAV SRAPGGKCER
CWMYHIAVGN DLEHPSLCPR CAGVLKK