Gene Dtox_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1033 
Symbol 
ID8427972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1054946 
End bp1056187 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content33% 
IMG OID645033368 
Productdiguanylate phosphodiesterase 
Protein accessionYP_003190542 
Protein GI258514320 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTGTTT TAGACATAAA TACCCCTGAC ATTAAAAAAA TTATTGAACA AGAACATATC 
ATAACACATT TCCAACCAAT CTTATCTGTA AGAAAACGAT CAGTCATTGG TTTTGAGGCC
TTGAGCAGGG GTATAGATCC TAATACAAAA ACAATTATTC CCCCAAACAT TCTGTTTGAA
TACGCAGCAA AACAACAGTT AACTCTGGAG TTAGACAGAT TATGCAGAAA ACTAGCCTTA
GCCAATTTTA AACTGGTACA GCAAAAAGTA AAAAACAGCC TTCTCTTTCT TAATTTTGAT
ACTACAATAA TTGACAAAGG TGTAGTTGGT TCCGGCAATT TGCTAAATAT GGTTCGCTGT
TTTAATGTAG ACCCACAAAG AATAGTAATT GAAATTAAAG AATCTGAAGC TAATAATCTA
AAGGAACTTG ATAAATTTAT TAATAATTAT AAAAACTATG GTTTTATAAT CGCTTTGGAT
GATATTGGTT CAGGACACTC AAATTTGAAT AGAATATCCC TGGTAAAACC AGACCTTCTA
AAACTGGATG CCTTTTTAAT CAGGAATATA AATAAGGAAT TTCACAAGCA GGAAGTTTTT
AAATCACTGG TCAACCTTGC TAAAAAAATA GGTGCGCTGG TTGTAGCTGA GGGTATTGAA
GGAGAAGATG AATCAATTTG TGCCTTAGAA CTGGGAGCAG ATATGTTGCA GGGTTATTAT
TTTGACAAAC CAAGTGTTAA TATTCTGTGT ACTAATAATG ACTACAAAGA CAAAATCAGA
CTGCTGGCGA ATAAATTCAA GAACCACATG ATCATAAAAA CTAAAACTGA CAAAATGCGC
AGGATGGAAT ATCGCAGAAT CGCCAGTAAT ATTTTAGCCC ATATGGATAG TATTGATACA
AAGGATATAA ATGCAAAACT ATCAGAAATA ATATCCAACT ATCCTATTAT GGATTGCATA
TATATTCTCA ATGAACAAGG AGTGCAAATA AGCAACACAG TATGCAATGA CAGCAAACTT
TTCAAACGCA GAGTATCTAT TTTTCGACCC GCTGCTCAGG GAACCGATCA TTCTTTTAAA
AAGTATTATT ATTTATTAAA AGACTCAGGA TCAGATTATT TTTTTACAGA ACCATATATT
TCCATGGCTT CCGGTAACCT GTGTGTGACA ATTTCCACTC TGTTTCAAGT AAAAGACAAT
AATTATATTT TATGCGCGGA TATTATCACT GATTTTGAGT AA
 
Protein sequence
MFVLDINTPD IKKIIEQEHI ITHFQPILSV RKRSVIGFEA LSRGIDPNTK TIIPPNILFE 
YAAKQQLTLE LDRLCRKLAL ANFKLVQQKV KNSLLFLNFD TTIIDKGVVG SGNLLNMVRC
FNVDPQRIVI EIKESEANNL KELDKFINNY KNYGFIIALD DIGSGHSNLN RISLVKPDLL
KLDAFLIRNI NKEFHKQEVF KSLVNLAKKI GALVVAEGIE GEDESICALE LGADMLQGYY
FDKPSVNILC TNNDYKDKIR LLANKFKNHM IIKTKTDKMR RMEYRRIASN ILAHMDSIDT
KDINAKLSEI ISNYPIMDCI YILNEQGVQI SNTVCNDSKL FKRRVSIFRP AAQGTDHSFK
KYYYLLKDSG SDYFFTEPYI SMASGNLCVT ISTLFQVKDN NYILCADIIT DFE