Gene Dtox_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0969 
Symbol 
ID8427908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp991467 
End bp993335 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content38% 
IMG OID645033307 
Productsensory histidine kinase AtoS 
Protein accessionYP_003190481 
Protein GI258514259 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000351141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.40359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATGA AAAAGAAGTA TATAACATTA AAATATGAAG GCTTCACAAA TCAACTGCTT 
ATATTAGTAG TTATTTTACT CCTGATTCCA ATAATTCTTT CAATGTATTT ATTTTATATG
CTGCATTCTA CGGAACTAGG CATAATTAAC AGTCATCGAA AGGTTTTGGA AGAAGCTATG
AATCAACTTG ACAGCAGTAT GAATAGCTCG TTCGATGAAA TTTTATCTGG CTTGAATGTG
GGGAATTTGC AAAGGCGCGA TCAAGAAAAA GCGCTTAATC AGGCGCTTAA GCCTGTGGTG
GACAATGTTA AGAAAAAGTA TCCCAATATG GATATGGGTT TTTATTCAGA GGAATTTGAT
GTAATCTTAG ATGGAGATAA CGAGCATTTA CATGAGAACT TTTCTACACG ACGAAAACGA
AATTTTGATG ACGCCCTAAA GACTAACAAT ATGGTATTTG AGGTTTTGGG CCAGGGCGGA
GACGGGCAGT TAGAAACCTA TCGGCCGTTA AGGCGTGACG GGAAGATTAT TGGAGCTATA
TGGGCTAATG AGGATATAAA ACCTATTCAA AAAAGGGTTG ACCAAATCCA GCAGGTTGTA
TATGTTGTAA TGATACTTGG GGTTGTTTTG GCTTTTGGCG GGGCTTTTAG TTTGATTAGT
AAATTTGCCA AAAATGTCAA TGAGATTAAA AAGGGTCTGA ATATCATGGG CAACGATCCA
ACCTTTATGC TGCCCAAAGC TACAGGTGAG TTAGGACAAA TAACTGATGC AGTTAATGAT
ATGTTCAATA AACTAATTGA TATTCAAAAC TATAACGAGC TTATTCTAAC AAGCATAGAT
GACGGCATCA TTACTATAGA TAAGAATGAA AAGATAATGA GTTTTAACTC AACGGCGGGT
GCAATGCTGG ATCTCGATAG TAATTGTATC GAGAAAAAAA TAGATGAGGT TTTTCCTCCG
GACTTCCCTC TATCCTATTA TCTGAAGAAT ACTCTTATTG AGGGTAAAGC GGTAAAGGAT
AAGGACTTGA TTTTCGAAAA CTTTACTGAT GGACCACGGC ACCTGTTGGT CAGTACATCC
TTAATGATTA ATGTCAGGCA GGAATTGGTG GGTGCTCTGC TGCATTTCAG GGATATTACA
GAGTTATCCC GTTTAAGGGA AAGCGTAAAC AGGCAGAAAA GACTTGCTTC ACTGGGTAAG
CTGGTAGCCG GTGTAGCACA TGAAATCAGA AGCCCGTTAA CTTCAATTAC CGGGTATATG
CAGTTTTGGA ATAAGGGTCG GGTTCCTTCT TCTAAATCAT TAAATATTGT TAACCAGGAA
TTAAATCGAT TGATCTCAGT AACTGATAAG CTGTTGCAGT TTGCCAGACC TTCCAGAGCG
GTATTTGAAC CGTATGAATT AAATATTTTA ATCAGAAGAG CCGTGCAATT TTTTAGAGAT
ATACACGGCA GCAGTGATGT TAAGATTTCC TGTAATTGTG CGGAAAACTT GCCTTTAGCC
TGGATAGACG CACATCAAAT GGAACAGGTT CTGTCTAATA TCCTGTATAA TGCTTATCAG
GCTATAAACC GCACAGGAAA TTTAGAGATA ACGACCTGGC TGGAAAAAGA AAGGAATATG
TTATGCGTGG GAGTGAGGGA CAATGGCTGC GGTATCCCTA AAGATGTCAT ACAAAATATG
TTTGAGCCGT TTTACACCAC TAAATCGAAA GGTACAGGAT TGGGGCTTTC TATTGCAAAA
GAGATAATAT CAGCGCATAA CGGGGAAATT CAGGTGGAAA GTGAACTAAA TGTTGGGACT
ATGGTTGTAA TTTATTTACC GATGTTTATA GGGGATGATA TGAATGTCAA AAGTGTTGAT
AGTCGATGA
 
Protein sequence
MLMKKKYITL KYEGFTNQLL ILVVILLLIP IILSMYLFYM LHSTELGIIN SHRKVLEEAM 
NQLDSSMNSS FDEILSGLNV GNLQRRDQEK ALNQALKPVV DNVKKKYPNM DMGFYSEEFD
VILDGDNEHL HENFSTRRKR NFDDALKTNN MVFEVLGQGG DGQLETYRPL RRDGKIIGAI
WANEDIKPIQ KRVDQIQQVV YVVMILGVVL AFGGAFSLIS KFAKNVNEIK KGLNIMGNDP
TFMLPKATGE LGQITDAVND MFNKLIDIQN YNELILTSID DGIITIDKNE KIMSFNSTAG
AMLDLDSNCI EKKIDEVFPP DFPLSYYLKN TLIEGKAVKD KDLIFENFTD GPRHLLVSTS
LMINVRQELV GALLHFRDIT ELSRLRESVN RQKRLASLGK LVAGVAHEIR SPLTSITGYM
QFWNKGRVPS SKSLNIVNQE LNRLISVTDK LLQFARPSRA VFEPYELNIL IRRAVQFFRD
IHGSSDVKIS CNCAENLPLA WIDAHQMEQV LSNILYNAYQ AINRTGNLEI TTWLEKERNM
LCVGVRDNGC GIPKDVIQNM FEPFYTTKSK GTGLGLSIAK EIISAHNGEI QVESELNVGT
MVVIYLPMFI GDDMNVKSVD SR