Gene Dtox_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0911 
Symbol 
ID8427850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp922005 
End bp922823 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID645033254 
Producttryptophan synthase, alpha subunit 
Protein accessionYP_003190428 
Protein GI258514206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0159] Tryptophan synthase alpha chain 
TIGRFAM ID[TIGR00262] tryptophan synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000294001 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000028477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAGA AGAGATTAGC TGAGCTGAGA AAAAACGGTG AGAAAGCGTT GATTCCCTTT 
GTTACGGCAG GGGACCCCGA TCTGCCAACT ACAGTTAAGC TGGTTCTGTC TATGGCGGAA
GCGGGCGCTG ATGTGATTGA ACTGGGAGTG CCTTTTACCG ATCCGGTAGC TGACGGACCG
GCTATTCAAA AAGCCTCTTT GCGTTCCCTG GCCGGGGGTA CCAATCTGGC CGGTATTCTT
GATTCGGTCA GGGAAATCAG GCAAAAATCT GATATACCGC TGGTGCTTAT GACTTATTAC
AACCCGGTTT TCAGGTTTGG TATAGATAAA TTTGTCGCCG AGGCGGCAGA GGCGGGAGTG
AACGGCCTGA TCATGCCGGA TGTGCCCCTG GAGGAATCAG GACCTCTGGC AAAACCGGCC
AGAGAAAAGG GTATTGACTT GATTCCCCTA GTAGCTCCCA ACAGTCCGGA AGAGAGAATT
AAGAAAATCA CAGCCGAAGC AGGCGGGTTT ATTTATTGTG TATCTTCTCT GGGTGTTACC
GGGGTGCGCA AATCTATCAA GACTGACATA GCCAATTTTA TCAGCCGTGT TAAAAAGTAT
ACGGAGCTAT CCGTAGCAGT GGGTTTTGGC ATTTCCGGAC CGGCTCAGGC GGCTGAAATG
GCTGCCTATT GCGATGCGGT TATTGTGGGC AGTGCCCTGG TCAACTTGAT TGAAGCTAAT
GCTGCTTCCG CTGAACTGGC GGAAATACTG GCCGGAAAAG TTCGCGAGTT GAAAGCTGCC
ATCAGCCGGA AGGAGGGTGA GGCAGTTGCC GCAGTGTAA
 
Protein sequence
MIEKRLAELR KNGEKALIPF VTAGDPDLPT TVKLVLSMAE AGADVIELGV PFTDPVADGP 
AIQKASLRSL AGGTNLAGIL DSVREIRQKS DIPLVLMTYY NPVFRFGIDK FVAEAAEAGV
NGLIMPDVPL EESGPLAKPA REKGIDLIPL VAPNSPEERI KKITAEAGGF IYCVSSLGVT
GVRKSIKTDI ANFISRVKKY TELSVAVGFG ISGPAQAAEM AAYCDAVIVG SALVNLIEAN
AASAELAEIL AGKVRELKAA ISRKEGEAVA AV