| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0904 |
|---|
| Symbol | |
|---|
| ID | 8427843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 914912 |
|---|
| End bp | 915931 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645033247 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003190421 |
|---|
| Protein GI | 258514199 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000034525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000051427 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTATAG TTATGTCTAT TGAATCCACA GACGCACAGA TAGAGGCAGT TATAGAGAAA
TTAGATGGTC TGGGTTTTAA GACACAGGTC ATTCGCGGGG TAAAGAGAAT AGTTATAGGT
GCGGTAGGTG ACCGGCAGGC GCTCGACAGC GTTAGTCTGA AACAAATGCC AGGTGTGGAG
GATATTGTTA AAATTATGAA GCCTTTCAAA ATGGTCAGCA GAGAAGCCAG GGAAGAAAAC
ACGGTTATTA ATATACGCGG TATCAGCATA GGTGGAGAGG GCGTTGTTGT TATGGCCGGT
CCCTGTGCGG TGGAAAGCAG GGAACAGCTT TTGACCGCCG CCCGGCAGGT TAAAGCTGCG
GGTGGTCATG TCCTGCGTGG CGGTGCTTTC AAACCACGAA CATCTCCTTA CAGTTTCCAG
GGTATGGAGG AGGAGGGTTT AAAGCTTTTA AAAGAAGCTT CGGAGGAAAC AGGTTTGCCA
ACGGTGACGG AAGTTATTGA TGAACACAGT TTGCAGCTGG CGCATGATTA TGTAGACATA
ATACAAATCG GTGCCAGAAA TATGCAAAAT TTCCGTTTGC TCAGGGCGGC CGGACAGACA
GATAAAATTA TTTTACTGAA AAGAGGATTG TCCGCTACCA TAGAGGAATG GTTAATGTCA
GCCGAGTATA TTATGTCAGA GGGCAATGGC AAGATTATTC TCTGCGAGAG AGGTATCCGT
ACTTTTGAAA CCTATACCCG CAATACTCTC GATCTCAGTG CCGTTCCGCT GGTTAAGAGG
CTCAGTCACC TGCCGGTAAT TGTTGATCCC AGCCATGCCA CAGGTGACAG GCAGCTGGTT
GTGCCTATGT CTCTGGCGGC TGCGGCGGGG GGTGCGGACG GTCTGATAGT GGAAATGCAT
CCGGAACCGA GTAAAGCTCT TTGTGACGGT GCACAGTCTC TGCACCCGGG GGAACTGGTT
GGCTTGATAG CTAAATTAAC AAAAATGATG CCTGCGATAG ATCGCACTAT GTCAGTTTAA
|
|---|
| Protein sequence | MIIVMSIEST DAQIEAVIEK LDGLGFKTQV IRGVKRIVIG AVGDRQALDS VSLKQMPGVE
DIVKIMKPFK MVSREAREEN TVINIRGISI GGEGVVVMAG PCAVESREQL LTAARQVKAA
GGHVLRGGAF KPRTSPYSFQ GMEEEGLKLL KEASEETGLP TVTEVIDEHS LQLAHDYVDI
IQIGARNMQN FRLLRAAGQT DKIILLKRGL SATIEEWLMS AEYIMSEGNG KIILCERGIR
TFETYTRNTL DLSAVPLVKR LSHLPVIVDP SHATGDRQLV VPMSLAAAAG GADGLIVEMH
PEPSKALCDG AQSLHPGELV GLIAKLTKMM PAIDRTMSV
|
|---|
| |