| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0785 |
|---|
| Symbol | aksA |
|---|
| ID | 8427723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 795554 |
|---|
| End bp | 796696 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645033142 |
|---|
| Product | trans-homoaconitate synthase |
|---|
| Protein accession | YP_003190317 |
|---|
| Protein GI | 258514095 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC GTAAAATTTT GATTGTGGAT ACTACTCTCA GAGACGGTGA GCAGACTGCC
GGGGTAGTGT TTGCCAACAG GGAAAAGGTG CGTATCGCAA AGCTATTGGA CGAGTTAGGA
GTGCACCAAA TTGAAGCTGG TATTGCCATT ATGGGCGGGG ATGAGGCTGA GTCTATCAAA
GCTATTTGCA AGTCAGGTTT AAAAGCCAGT GTTATGGGCT GGAACCGACC GGTAATTAAG
GATATAGATG CTTCGCTGGC CTGCGGAGTA GATGCTCTGG CTATTTCCAT ATCCACCTCG
GATATTCATA TTAAACACAA GCTCCATAAA ACCCGTGAAT GGGTTTTGGA ACAGATGACC
AGTGCGGTGC ATTATGCCAA AAAAGAGGGT ATGTATATAT CGGTTAATGC TGAAGATGCA
TCCCGCAGCG ATATGGATTT TCTCATTGAG TTTGCCAAGG CCGCCAAAGA AGCGGGAGCA
AATCGACTTC GTTATTGTGA TACTGTCGGT ATCCTGGAGC CTTTTACAAC ATACCAGAAC
ATTAAAACTA TTATTGAACG AGCCCAAATT GATGTGGAAA TGCATACACA TAATGATTTT
GGCATGGCAA CTGCCAATGC GCTGGCAGGT GTGAAAGCCG GTGCCACTCA CGTGGGTGTG
ACCGTTATAG GTTTGGGAGA GCGGGCAGGC AACGCGGCTT TAGAAGAAGT GGTTATGTCA
TTAAAGCATT TATATAATAT GGATCTTGGT TTTAAAACGG AATTATTCAC TGAGGTGGCT
GAATATATTT CTCGCGCCTC CGGACGTGAA TTGCCGGCCT GGAAAGCTAT TGTCGGTTCT
AATATGTTCA GGCACGAGTC AGGTATCCAT GCTGACGGTG CCCTGAAAAA CCCAAAAACC
TATGAAGCTT TTTTACCGGA AGAGGTTGGT CTGGAGAGAC AGATTGTTAT TGGCAAGCAT
TCAGGCACTG CGTCAATTAA GGCTAAATTT GTTGAATTTG GCATTCATTT AAATGATCAC
CAGGCAGAAG AAATCCTGCC TAAAATCCGT TCTTACACTG TGTCAATGAA ACGGCCTTTA
TTTGACAAAG AGCTTATGTA TATTTATGAT AGTTATTTTG GCGATATAAA GCATGTTAAA
TAA
|
|---|
| Protein sequence | MSERKILIVD TTLRDGEQTA GVVFANREKV RIAKLLDELG VHQIEAGIAI MGGDEAESIK
AICKSGLKAS VMGWNRPVIK DIDASLACGV DALAISISTS DIHIKHKLHK TREWVLEQMT
SAVHYAKKEG MYISVNAEDA SRSDMDFLIE FAKAAKEAGA NRLRYCDTVG ILEPFTTYQN
IKTIIERAQI DVEMHTHNDF GMATANALAG VKAGATHVGV TVIGLGERAG NAALEEVVMS
LKHLYNMDLG FKTELFTEVA EYISRASGRE LPAWKAIVGS NMFRHESGIH ADGALKNPKT
YEAFLPEEVG LERQIVIGKH SGTASIKAKF VEFGIHLNDH QAEEILPKIR SYTVSMKRPL
FDKELMYIYD SYFGDIKHVK
|
|---|
| |