| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0702 |
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| Symbol | fliR |
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| ID | 8427640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 714501 |
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| End bp | 715268 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645033064 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_003190239 |
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| Protein GI | 258514017 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR
[TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.310236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATAGATA TGGATTTGTT AGTGGTCTTC TTTTTAGTTT TTATAAGGAT AACCGCTTTT
ATGATGACCG CACCGTTTTT TGAGTATCGC AATATACCCA ATCTGCTGAA GATAGGTTTT
TCTCTGTTGC TGGCAGGGAT TGTTTTTCCT GTTATAAAAA CATCCGGTTT TAGTGTGCCC
GGTGGAGTTT TGGGCTATAT CCTGGCTGTA ATGGCGGAGG CAGGTGTAGG CTTGATGCTT
GGTTTGATAG CCTCTTTCAT TTTTCACGGC ATTCGTATGG CCGGTCAGCT CATAGATCTT
CAGATAGGCT TTGCCATGGC CATGGTTTTT GACCCGTTAA GTGAAATGCA GACAACTATT
ATAGCCAGAT TTTTAAATCT TTTGGCTTTA ATATTTTTTC TTAATGTAAA CGGTCATTAC
TATTTGATTG AGAGTTTGGT CAAAAGCTAT GATCTGGTGC CTCTGACAGC AATGGCAATA
AAGTCGGGTG TCGTTCTCAC TGTAGTTAAG TTTTTCAGCG GGATGTTTGC CCTGGCTTTT
CAGATAAGCG CGCCAATTAT AGCCGTATTG GTGATTATAG ATTTATCATT GGGGTTTGTT
TCCAGAACAG TTCCGCAGTT GAATGTTTTT ATGTTAGGTT TTCCCGTGAA GATTGTGGTG
GGGATTTTAA CACTCAGTGT TGTTGTTCCT GTGCTGGGCA CATTGCTGCA GGACGTTTTT
AAAACTATGC ATAATAATAT GTTAATCTTA TTGCGGGGTC TTACATAA
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| Protein sequence | MIDMDLLVVF FLVFIRITAF MMTAPFFEYR NIPNLLKIGF SLLLAGIVFP VIKTSGFSVP
GGVLGYILAV MAEAGVGLML GLIASFIFHG IRMAGQLIDL QIGFAMAMVF DPLSEMQTTI
IARFLNLLAL IFFLNVNGHY YLIESLVKSY DLVPLTAMAI KSGVVLTVVK FFSGMFALAF
QISAPIIAVL VIIDLSLGFV SRTVPQLNVF MLGFPVKIVV GILTLSVVVP VLGTLLQDVF
KTMHNNMLIL LRGLT
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