Gene Dtox_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0545 
Symbol 
ID8427480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp559426 
End bp561234 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content44% 
IMG OID645032910 
ProductABC transporter related 
Protein accessionYP_003190088 
Protein GI258513866 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGAG AAGGTTTATT TCGGAGATAT TCCTCCAAGG GTGAGAAGAA TTATCGTTTT 
TCTCAGATGG ATGCCGGAGC GCTGCATTTT TTCTGGAAAT ATTTAGAACC TCACCAATTA
AGTTTGTATG GTGCTATTGC CGCAACCTTG CTTGTTACTG CCTGTACGAT TGCCGGACCT
TATTTGCTTA TGAAAGGCAT TGACAGGTAT ATTGCCAGCC GGGATTTAAC CGGCCTTACC
GTAATAACTC TGCTCTACAT TGCTGTTAAC GTCGCTTTAT GGGTGGGAAC ATTCTGGCAG
TCCTATCTGG CCGGCGCTGT TGGTGAAAAA GTTGTTTTTG GCATACGCCA GGATTTGCTG
GCACATGTGG AAAGCTTGTC TCTTGACTTT TTTGAATATC GTTCACCAGG TGAAATTATG
TCCAGGCTGA TTCACGATGT GAATACTCTG TCAGATCTGA TCTCTACAGG GTTGGTAGAT
TTCGTTGGGG ATGTATTGGT TATCATAGCT ATTGTGGGGA TGATGCTGCT TCTCAACACA
TCCCTTGCTT TATTGACTTT TACAACAATT CCCCTCATTT ATTTTTTTAT TTCATTTTGG
GGCGGAAAAA TGCGGAAGGC ATTTCAAGAT GTACGGGTAA AAATAGCGGA TATTAACTCA
GAACTTCAGG AAAACATTAC AGCTATCAGG GTTGTTCAGT CGATGTCTCG GAAAGAAATT
AATATTGAGA AATTTGAAGC ACTAAACCAA AATAATATGA GGGCTAACAT GCGGGCTATG
AGCATTTTTT CCCTATTTTT TCCCATGATT AGCTTTGTCG GTAGTATTGG CACTGCTCTG
ATTTTATGGC ATGGTGGACA ACTGGTTGTT GGTAAAGCCG TCAGTGTTGG ATTGTTGGTA
GCTTTTTTAC AGTATGTGGA GAGATTTTAT CGTCCCCTGC GCGAAATCAG TCAGAGTTTC
AATTTGTTTC AATCCGCAGC AGCTTCACTG GACAGGATAT ATGAATATTT AAAGATAAAA
GCTGTTATAG CAGAACCTGC CGTTACCAGT CTTCCGTCAG CCGGATTTCG GGGAGAAGTT
GAGTTCTGTC AGGTTAGTTT TGCCTATGTC AAAGATCGTC CTGTGCTGCA AAACATAAAT
ATGCATATTG AATCAGGTAC CACAGTGGCC CTGGTTGGAC ATACCGGAGC AGGCAAAACA
ACAATTTTAA GCCTTTTAGC CCGTCTTTAT GAGGTTCAAG AAGGGCAGAT TCTTATTGAT
GGTGTGGATA TACGGCAAAT TGCCGCTGAT CAGTTGCGTA AAGTTTTGGC AGTTGTCCAG
CAGGATCCGT TTTTGTTTTC GACCACAGTA ATGGAAAATA TACGTTATGG TAACCCGTCA
GCAACGGATG AAATGGTTAT TGAAGCGGCA AAGGCACTGG GGGTCCACGA TATAATAGAA
CAACTGCCGG CGGGCTATCA AACAGACGTG GGACGACGGG GTGAGCGTCT TTCCGGCGGG
CAGGTGCAGA TAATAGCTCT GGTGCGGGTA TTTCTGGCTG ACCCTCTTAT TCTGGTGTTG
GATGAAGCAA CCTCCAGCCT GGATAGTCGA ACAGAAGCCA ATATCAAACA AGCACTGATA
CGTTTGCTCG AAGGCCGTAC CGGAATCATC ATAGCTCACA GGTTTGTTTT ATTGGAACTG
GCGGACCGGA TATTTGTTTT GGAGGGAGGC AGCATCACAG CCTCCGGTTG TCATGAGCAG
GTATATAGGC AAAGTGAGTT ATACAGGCGT TTATACGAAG GACAGTTACT TTTTGGAGAT
ATGGTATGA
 
Protein sequence
MRGEGLFRRY SSKGEKNYRF SQMDAGALHF FWKYLEPHQL SLYGAIAATL LVTACTIAGP 
YLLMKGIDRY IASRDLTGLT VITLLYIAVN VALWVGTFWQ SYLAGAVGEK VVFGIRQDLL
AHVESLSLDF FEYRSPGEIM SRLIHDVNTL SDLISTGLVD FVGDVLVIIA IVGMMLLLNT
SLALLTFTTI PLIYFFISFW GGKMRKAFQD VRVKIADINS ELQENITAIR VVQSMSRKEI
NIEKFEALNQ NNMRANMRAM SIFSLFFPMI SFVGSIGTAL ILWHGGQLVV GKAVSVGLLV
AFLQYVERFY RPLREISQSF NLFQSAAASL DRIYEYLKIK AVIAEPAVTS LPSAGFRGEV
EFCQVSFAYV KDRPVLQNIN MHIESGTTVA LVGHTGAGKT TILSLLARLY EVQEGQILID
GVDIRQIAAD QLRKVLAVVQ QDPFLFSTTV MENIRYGNPS ATDEMVIEAA KALGVHDIIE
QLPAGYQTDV GRRGERLSGG QVQIIALVRV FLADPLILVL DEATSSLDSR TEANIKQALI
RLLEGRTGII IAHRFVLLEL ADRIFVLEGG SITASGCHEQ VYRQSELYRR LYEGQLLFGD
MV