Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0517 |
Symbol | |
ID | 8427452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 527090 |
End bp | 527989 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645032882 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_003190060 |
Protein GI | 258513838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.492538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAAAGA TTTTTAAGTT ATTAGGTATT GTTGGTATGC TGATTGCGTT AAGTACATTA CTCTTTGGTT GCGGCAGTAG TGACTCCAAA GATGGTCAAA GAAATGTCAG TGTTAAAGAA AAATTTAATG GTGAGATTAT TGGTATCGAG CCTGGTGCCG GTTTGATGAA GAAAACTGAA CAAGCTATTA AGGATTATGG TCTTGATTTT ACTCTTCGTG ATAGCAGTAG TGCAGGTATG TCTGCTACTC TAGCCAATAA AATTAAGAAT AAGGAATGGG TTATAGTAAC TGGTTGGACA CCACACTGGA AATGGGCAGC TTATGATTTA AAATATCTTG AAGATCCTAA AAAAGTTTTT GGTGAAGAGG AACATATTTC GACTATTGCA CGTAAAGGAT TAGCAGAAGA TAAGCCGGAA GCTTATAAAA TATTGGACAA TTTTCACTGG ACCCCAGATG ATATGCAGAC TGTTATGTTA GATGTTCATG AGGGTATGAG TCCGGACGAT GCTGCTAAGA AGTGGATTGC TGCGCACCGG GATAAAGTTG TTGAATGGAC TAAAGATGTA GATAAGTCTG CTGCTGCAGG AAAAACAGTT AAGTTAGGTT ATGTTGAGTG GGATTCTGAA ATTGCCAGTA CACATGTTGT TAAAAATGTA ATGCAGGACT TAGGATTCAA AGCTGAAGCT ACTCCGGTAG ATAATGCAAT AATGTGGCAA GGCGTATCAC AGGGTAGTTT TGATGCTATG GTATCAGCAT GGTTACCAGG TACTCATGGA GATCTCTATG ATAAAGTAAA GGATACAATT GACAACCTTG GTCCAAACTT GGAAGGAGCA AAAATTGGTC TTGTAGTTCC AGACTATGTG ACTATTAACT CAATAGAAGA ATTAAAATAA
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Protein sequence | MRKIFKLLGI VGMLIALSTL LFGCGSSDSK DGQRNVSVKE KFNGEIIGIE PGAGLMKKTE QAIKDYGLDF TLRDSSSAGM SATLANKIKN KEWVIVTGWT PHWKWAAYDL KYLEDPKKVF GEEEHISTIA RKGLAEDKPE AYKILDNFHW TPDDMQTVML DVHEGMSPDD AAKKWIAAHR DKVVEWTKDV DKSAAAGKTV KLGYVEWDSE IASTHVVKNV MQDLGFKAEA TPVDNAIMWQ GVSQGSFDAM VSAWLPGTHG DLYDKVKDTI DNLGPNLEGA KIGLVVPDYV TINSIEELK
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