Gene Dtox_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0490 
Symbol 
ID8427425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp501626 
End bp502354 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content33% 
IMG OID645032861 
ProductVanZ family protein 
Protein accessionYP_003190039 
Protein GI258513817 
COG category[V] Defense mechanisms 
COG ID[COG4767] Glycopeptide antibiotics resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00564626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCTTTA TGATTTTAAT GTTTATTATA GTGTCGATTA CATGGTTTAT TAGTACTTTG 
CCATTCTTGA TTCCATACCA TATACTACTG ACCTCTCAAA GCAAAAAGAT TGGCTATAAG
CTGTCAATTG AACATATTGC AATCGTATAT ATCTTTGTGT ACTACCTTAC TGGTGTGCTA
AGTTTCACTG GTATTCCTTC CATAAGGGAT ATTGTTCATA ACAGCTTTGG AATAATAACA
CCAAAGGGGT TGAATTTCCC ACAGGATGAG ATTAATCTGA TTCCCTTTTA CTGGATTACA
GAAGGTGTTC GCCCATATAT AGAAAATATA TTGCTTTTTA TACCTCTTGG ATTTATACTT
CCATGTATTT GGGGAAAATA TGAAGTGTTA TGGAAAACAG CATTATCCGG TATTACATTC
TCTCTTATAA TAGAATTGAG TCAATTGTTC AATAGAAGAG TAACGGATAT TGATGATTTA
CTGATGAATA CTCTCGGAAC GTTAATCGGA TGGGTAATTT TTAGGCTGCT GATAGAACAT
TTATCTAAAT TACAGGACAA GGTTTCTGTC CAAAGTACCA ATATCGAAAA AATTCCCTTG
CTCCTTCGTG AAGAGGCATG TTTTTATATG GTCAGCGCAT TCGCCGGTAT GTTCTTTGTG
TTTTACCCAT TTTTAAGATC TTTATTAATC CCATTTTTAA GATCTTTATT TGGATTTGTT
TTGATTTAA
 
Protein sequence
MIFMILMFII VSITWFISTL PFLIPYHILL TSQSKKIGYK LSIEHIAIVY IFVYYLTGVL 
SFTGIPSIRD IVHNSFGIIT PKGLNFPQDE INLIPFYWIT EGVRPYIENI LLFIPLGFIL
PCIWGKYEVL WKTALSGITF SLIIELSQLF NRRVTDIDDL LMNTLGTLIG WVIFRLLIEH
LSKLQDKVSV QSTNIEKIPL LLREEACFYM VSAFAGMFFV FYPFLRSLLI PFLRSLFGFV
LI