Gene Dtox_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0316 
Symbol 
ID8427251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp327675 
End bp328508 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content43% 
IMG OID645032714 
ProductABC transporter related 
Protein accessionYP_003189892 
Protein GI258513670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0293906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGAAGG TATTGTTTCA ACTGAATGAC CTTTGCTTTA GTTACTTCCA AAGGACTATC 
GAAAAACAGG TTCTAAATTT TATTAATAAG CAAGTCCGTG CAGGTGAATA TTTGGCTTTG
ATTGGCGGGA ATGGTTCGGG GAAAACCACT CTGGCCAAAC ACCTAAACGG GTTGTTGCTT
CCTACGAGCG GAAGTTTGGC GGTTGACGGT ATGGACACGG CCAATCAAAA TAATCTGTTA
GCAGTCAGAC AAACAGTAGG TATGGTGTTT CAGAATCCCG ACAACCAGAT AGTTGCGTCA
GTTGTAGAAG AAGATGTAGC TTTTGGTCCG GAAAATTTGG GAGTAGATGC GGCCGAAATT
AAACAAAGGG TAGTAATGGC TTTAGAAACT GTTGGATTGG CAGGCTATCG CAACTTCACA
CCTGATTTTC TGTCAGGTGG TGAAAAGCAG AGATTAGCCT TAGCCGGGGT ACTGGCTATG
AAACCAAAAT GCTTGGTTTT AGACGAGGCT ACTTCTATGC TGGATTGTGC GGGTCGCTAT
CGTTTATTGA AAATAATATC CAATCTGCAC AAGGAAACAG GTTTAACAGT TGTAAATATA
ACGCACGATA TGAACGAGGC AGCCTTGTCA GATAGGATAT GGGTTTTAAA CAAGGGCCAA
ATAATACTGG ACGGGCCGCC GAGAAAAGTT TTTCAACAAA GAGAACTTTT GCACGAATGC
GGCTTGGATC TTCCTGATAT ACCTGAGATT TGCCGGAGGC TGAGTATTTC CGGGCTAGCT
GTACCTTTAG ATTTGCTTGA CTCAGAGGAT CTGGTGAATT ATCTATGTCA ATAA
 
Protein sequence
MQKVLFQLND LCFSYFQRTI EKQVLNFINK QVRAGEYLAL IGGNGSGKTT LAKHLNGLLL 
PTSGSLAVDG MDTANQNNLL AVRQTVGMVF QNPDNQIVAS VVEEDVAFGP ENLGVDAAEI
KQRVVMALET VGLAGYRNFT PDFLSGGEKQ RLALAGVLAM KPKCLVLDEA TSMLDCAGRY
RLLKIISNLH KETGLTVVNI THDMNEAALS DRIWVLNKGQ IILDGPPRKV FQQRELLHEC
GLDLPDIPEI CRRLSISGLA VPLDLLDSED LVNYLCQ