| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0214 |
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| Symbol | |
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| ID | 8427138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 230922 |
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| End bp | 234515 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645032601 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003189790 |
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| Protein GI | 258513568 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0330142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTT TCGTGAACGG GATTAAGGAA TGGCTGCTTC AGCCGTTAAT CAACACCCCC
GAGTTTATCG ACTTGCAAAA CGGGTTGGCT AAAAACCGGC GGTGTCAGGT AGTGTCTGGT
CTGTCCTCTG CACAGAAAAG CTTTGTTATA GCCGGTTTAG TACAGGCCAT GAGACAGACA
GCATTAATTA TTACTGCCTC GGATCAAGAA GCTGCCGGAT TGACAGAAGA TTTGAAAAAT
CTGCTGCCGG ACCTAAAGGT TATGACTTTT CCTGCTCGCC GGCTTTTACC CTATCAGGTT
TTTGCCTACA GTAAGGAAAT ATTAAGACAG CGCATGGAAG TGTTGGAATC CCTTTGCCGG
GGAGAAAATC CGGTTATTAT TGCTCCCGTA GAGGCTTTAA TGCGCAGGCT TGGCCCTTGT
GCGGACTTTT GCTCGGCCCG TTTGGAACTG AATGTGGGAC AGCGCTATGA GCTTCCGCAA
ATGGTTTCTT GTCTCCATGA GCACGGATAT GAAAGGGTCA ATCTGGTGGA AAGTCACGGG
CAATTTAGTG TTCGGGGAGG TATTTTGGAT ATTTATCCGA TAACCGGTAT AAACCCGGTG
CGGGTGGAGT TTTTTGATGA TGAAGTTGAT TCTATTCGTA TATTTAACCC CGGCACTCAA
AGATCGGAAG AGAATATGAG TCAGATGCAA ATATTCCCTG TAAGGGAGAT GGTCGTGCGG
CAAGGTGATT GGGAGAGAGC TTACCAAGCA TTATCACAAG AGTACCAGTA CCGGCGGCGG
AACCTGGATA AAAAATCTGA CTCGGAGGTC TTGGACAATT TATCTCGCTG TGAAGAAGTG
TTGGACAATA TTAGCCAGGC TAAGTATTTT GATTCCATAG AGCAATATCT GCCCTATTTT
TATGATGAAG ACATTACGCT GTTAAATTAT ATCAAGGCTG AGTCTCTGGT GCTGGTGGAT
GAACCCTCAC GCTTGCAAGA AAATACAGAC CTGCTTCAGC GGGAGAGAAC AGAAACTTAT
TCCGAGCTGA TGAAAGCCGG CCGGGTCTTG CCCGGGCAAT TTAAAGGCTA TACGGACTGG
GCGGGAATCC ATAAGCAGAT AACTGGTTTT AGGGCGATTT ATTTTTCCTT TTTGCCGAGG
CAAGCAAGTT TATGGCGGTC CTGTAATACA GTAAATTTTC CGGTTAAAAC AATGCAAAAT
TTTATGGGTA AAGTGGAGAT GCTGGCAGAA GAAATCAGGC ACTATAAAAT GTCCCGGTAT
GGTGTAGTTC TGCTAGTAAA AAACAGTGAC AGAGCGGCCC AGTTAGTGTT ATCTTTGCGG
GATTATGACT TGGAGGCCCT GTATTTAAAA AAAGACCTCA GTGAGTATCC GCATTTAAAT
GTGCAGGAAG ACATGCCGGA CTCAAAAACA AAGTATAAAG TTGACCGGGG ACGCGGGCAA
ATAGTAATCC TACCTATGCA CTTGTCCAAT GGTTTTGAGC TGGTTTCGGG TAAACTGGCT
GTTATTACTG AGACTGAGAT ATATGGTCAT AGAAAAAAAC CTTCTGTGCA AAGGCAAAGA
GTGCAGGACA AAATGGAGCT CTTTGCGGAA TTGAAAACAG GCGATTATGT GGTTCATGTC
AATCACGGAA TCGGCAGGTA TGACGGAGTT GTTCAGTTAA CTATCGGTGA TGTTAAGCGG
GATTATCTAT TAGTCAAATA TGCAGGTGAA GATAAATTAT ACATTCCCAC TGATCAGGTG
GAAATGATCC AGAAATATCT TGGCTCTGAA GGCGGAACTC CTAAGCTGTC CCGTTTGGGC
GGTGCTGAGT GGTCAAGGGT TAAGAGTAAG GTTAAAGAAG CTGTTAAAGA AATGGCCCAG
GAACTGTTAG CCCTTTACGC GGCCAGAGAG GCTGTGCAGG GCCATCCTTT CAGCAAAGAT
ACTGTGTGGC AGCAGGAATT TGAGGCCGCT TTTCCTTATG AAGAGACACC TGACCAGCTC
AAGGCAATTG AAGAAGTTAA AGCAGATATG GAAAGACCCA GGCCCATGGA CCGCTTGCTT
TGTGGTGATG TTGGCTACGG TAAAACAGAG GTGGCTTTGA GAGCAGCTTT TAAGGCTGTC
ATGGATGGCA AGCAAGTAGC CGTACTGGTG CCGACTACCA TCCTGGCGCA GCAGCACTTT
AACACGTTTA AAGAGAGATT TGCCAAATAT CCTGTAAATA TAGCCATGCT AAGCAGGTTT
ATAACAGCCA GGCGGCAGCG TCAGATAGTT CAGGAACTTT TACTCGGCCA GGTGGATATA
GTTATCGGTA CACACAGATT GGTGCAGGAT GATATCAAGT TTAAAGACCT GGGATTGGTT
GTCGTGGATG AAGAGCAGCG TTTTGGTGTA ACTCACAAGG AGAAACTTAA GCAGCTCAGG
CAAAATGTAG ATGTGCTGAC ATTGACAGCA ACTCCGATAC CCCGCACCCT GCATATGTCC
ATAGTTGGCG TGCGTGATAC CAGTCTTTTG GAAACACCTC CAGAAGATCG TATTCCGGTT
CAAACCTATG TCCTGGAGGA GGAACCTGTT ATTGTCAGAG AGGCAATTCG GCGGGAATTG
GGTCGGGGAG GACAGGTTTA CTATGTTCAT AACCGGGTAG CTGATTTAGA CCGTGTTGCT
GGCTGGCTGA AAGGGCTGGT GCCGGATGCT GCCATAGCCA TAGGGCATGG ACAAATGAAA
GAAGATCGCC TGGAAAATGT TATGCTGGAT TTTATGAATA AAAAGTTTGA TATACTGCTC
TGCACAACCA TTATAGAAAC AGGTCTTGAT ATTCAAAACG TAAATACTTT AATTGTCAAG
GATGCCGACT ATATGGGGCT GGCTCAACTA TACCAGTTAA GGGGAAGAGT TGGGCGTACC
AATAGGTTGG CTTACGCCTA TTGCACTTTT CGTGGTGACA AGGTTATGAG TGAGCTGGCC
GAAAAGAGAT TGTCAGCTGT CAGGGAATTT ACTGAATTTG GTTCGGGATA TAAGATAGCT
ATGCGTGATT TGGAAATCCG GGGTGCCGGC AATATTCTGG GACCTGAACA GCATGGACAT
ATTGCTGCAG TTGGGTTTGA TCTGTATTGT AGATTGCTTG AGGAGGCTGT GCTGGAAGCG
AAAGGAGGAG AAAACGCCAA GCCTATTGAA ACACTGGTGG AACTGCCTGT AACTGCTTAT
ATCCCGGATG AATATGTAAT TGATCTGAAT CAGAAAGTAG AATTATATAA GCGTATGGCT
AATATCAGGG ACATAAAGAT GCTTTCAGAA ATGGAAGACG AGCTTATAGA CAGGTTTGGT
GACATACCGG AACCGGTTTT AAACTTGCTT GCTGTAACCA GAATTAAGGC ACTGGCTGTC
AATTTAAAAA TTAAGAATAT TAGCCGTATT AATGGTTATT ATCGCCTGCA ATTTGCTGCG
AGCCATGATT TAACCGGAGA AAAATTAATA ACAGTCAGTG AAAAATACGG GGGCAAAGTT
AAGTTCAACC ATGCGGAGGG TGAATTTGAA ATTCGTTTGC AGACTGTCAG TAAAGATCAG
GAGACCAGGC TGACAATGTC TAGATTAGAA TCATTATTGA TGAATCTATT GTAG
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| Protein sequence | MNGFVNGIKE WLLQPLINTP EFIDLQNGLA KNRRCQVVSG LSSAQKSFVI AGLVQAMRQT
ALIITASDQE AAGLTEDLKN LLPDLKVMTF PARRLLPYQV FAYSKEILRQ RMEVLESLCR
GENPVIIAPV EALMRRLGPC ADFCSARLEL NVGQRYELPQ MVSCLHEHGY ERVNLVESHG
QFSVRGGILD IYPITGINPV RVEFFDDEVD SIRIFNPGTQ RSEENMSQMQ IFPVREMVVR
QGDWERAYQA LSQEYQYRRR NLDKKSDSEV LDNLSRCEEV LDNISQAKYF DSIEQYLPYF
YDEDITLLNY IKAESLVLVD EPSRLQENTD LLQRERTETY SELMKAGRVL PGQFKGYTDW
AGIHKQITGF RAIYFSFLPR QASLWRSCNT VNFPVKTMQN FMGKVEMLAE EIRHYKMSRY
GVVLLVKNSD RAAQLVLSLR DYDLEALYLK KDLSEYPHLN VQEDMPDSKT KYKVDRGRGQ
IVILPMHLSN GFELVSGKLA VITETEIYGH RKKPSVQRQR VQDKMELFAE LKTGDYVVHV
NHGIGRYDGV VQLTIGDVKR DYLLVKYAGE DKLYIPTDQV EMIQKYLGSE GGTPKLSRLG
GAEWSRVKSK VKEAVKEMAQ ELLALYAARE AVQGHPFSKD TVWQQEFEAA FPYEETPDQL
KAIEEVKADM ERPRPMDRLL CGDVGYGKTE VALRAAFKAV MDGKQVAVLV PTTILAQQHF
NTFKERFAKY PVNIAMLSRF ITARRQRQIV QELLLGQVDI VIGTHRLVQD DIKFKDLGLV
VVDEEQRFGV THKEKLKQLR QNVDVLTLTA TPIPRTLHMS IVGVRDTSLL ETPPEDRIPV
QTYVLEEEPV IVREAIRREL GRGGQVYYVH NRVADLDRVA GWLKGLVPDA AIAIGHGQMK
EDRLENVMLD FMNKKFDILL CTTIIETGLD IQNVNTLIVK DADYMGLAQL YQLRGRVGRT
NRLAYAYCTF RGDKVMSELA EKRLSAVREF TEFGSGYKIA MRDLEIRGAG NILGPEQHGH
IAAVGFDLYC RLLEEAVLEA KGGENAKPIE TLVELPVTAY IPDEYVIDLN QKVELYKRMA
NIRDIKMLSE MEDELIDRFG DIPEPVLNLL AVTRIKALAV NLKIKNISRI NGYYRLQFAA
SHDLTGEKLI TVSEKYGGKV KFNHAEGEFE IRLQTVSKDQ ETRLTMSRLE SLLMNLL
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