Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0202 |
Symbol | |
ID | 8427126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 220762 |
End bp | 221463 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645032589 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003189778 |
Protein GI | 258513556 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0023081 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATTATC CTAAATTAAA GGAAGAACCT AAATTAATTC CAATTAAACT GGATAATTAT AAACCATTGC GGGAAGTGGT TTTTGAATCT TTACGGGAAG CTATTATAAA TGGGAGATTA TCTCCGGGCG AACGTTTGAT GGAGATTCAA CTGGCCGAGG AGATGGGTGT GAGCCGGACT CCTGTGCGTG AGGCCATTAG AAAATTAGAG CTGGAAGGTT TCGTGGTTAT GATTCCCCGA AAAGGTGCTT ATGTAGCTGG AATCTCCATA AAGGATATCG CTAATGTTTT TGAAGTAAGA GCGGCTCTGG AGGCGTTGGC AGCCGGTCTG GCTGCGGAAA GAATAACGGA AGAGGAACTG GATGAGCTGG AACGCTACCT TGTAGAAATA TCAGAGTTGC GTGAAAGCGG GAATTTGGAT GCTATAGTCG AGAAAGACAC TATGTTCCAT GATGTTATTT ACAGGGCCAG CCGCAATGAA AGGTTGGTGC AGATAGTCAC TCACCTGCAG GAGCAAATTC ATCGTTTTCG TACCGCTTCA TTAGCAAGGC CCGGCAGGAC CAGAGATGCA CTGGATGAGC ACAAGAAGCT TGTGGAGGCT ATATCGGATA GGGATGTGGA ATTGGCTCAG AAGCTGGCCA GGGAGCATAT TGAAAATGCT GAGAACAGTA TGATCAGTGC TGTACAGGAG GCCGGTGTCT AA
|
Protein sequence | MDYPKLKEEP KLIPIKLDNY KPLREVVFES LREAIINGRL SPGERLMEIQ LAEEMGVSRT PVREAIRKLE LEGFVVMIPR KGAYVAGISI KDIANVFEVR AALEALAAGL AAERITEEEL DELERYLVEI SELRESGNLD AIVEKDTMFH DVIYRASRNE RLVQIVTHLQ EQIHRFRTAS LARPGRTRDA LDEHKKLVEA ISDRDVELAQ KLAREHIENA ENSMISAVQE AGV
|
| |