| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0088 |
|---|
| Symbol | |
|---|
| ID | 8427010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 90540 |
|---|
| End bp | 94163 |
|---|
| Gene Length | 3624 bp |
|---|
| Protein Length | 1207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645032483 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_003189674 |
|---|
| Protein GI | 258513452 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000440462 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG CATCAAAAAC TATGGACGGC AATGAAGCAG CTGCCTATAT CTCTTATCCT
TTTACGGAAG TGGCAGCCAT CTACCCCATA ACACCCTCTA CACCCATGGC CGAGAGTGTG
GATTTATGGG CCGCCCATGG TAAAAAGAAC TTTTTCGGAC AAACGGTGAG AGTTGTCGAA
TTCCAATCAG AGGCAGGAGC ATCGGGAGGG ATGCACGGTT CACTGGCAGC CGGCGCATTG
ACCACCACAT ATACGGCTTC CCAGGGTCTC TTATTAATGA TACCCAATAT GTATAAAATG
GCGGGTGAAC TGCTCCCCGC GGTATTTCAT GTTACCGCCA GAGCTATTGC AACACATGCT
CTATCCATAT TCGGCGATCA CCAGGATGTT ATGTCCTGCC GCCAAACAGG CGTGGCTCTG
CTGGCCTCTG CCAGCGTACA GGAGGCTATG GATTTAGGCT GCATTGCTCA CCTGTCAGCC
ATCAAGTCCA GAATACCCTT TCTGCATTTT TTTGATGGTT TTAGAACCTC TCACGAAGTG
CAAAAAATTG AGGTGCTGGA TTATACCGAG GTATCTAAAC TCTTGGATTA CGAGGCAATC
AAAGAATTTC GCGACAGATC CTTAAACCCT GAGCACCCTT CTATAAGAGG AACAGCACAG
AATCCGGATA TCTATTTTCA GGGCAGAGAA GCCTCCAACC CCCTATATGA TAAAGTGCCG
GATATCGTTG AGAGCTACAT GCGGGAAATC AGCAGAATAA CCGGGCGTGA TTACAAACCT
TTCGACTATT ACGGAGCGGA AGACGCCGAA TATGTGATCG TAGCCATGGG TTCAGTCTGC
GAAACAATTG ATGAAACAAT AGACTACCTC CGCGGAAAAG GAGAAAAGGT AGGAACAATA
AGAGTACGCT TATACCGCCC TTTCTCGGCT CAACATTTCT TTAATGTGCT GCCTCCGAGC
GTAAAAAGCA TAGCGGTACT GGACAGAAGC AAGGAACCCG GTTCTGTAGG TGAACCCTTA
TATCTGGATA TTGTCAAATC CTTTTACAAC AAAGATAAAA AACCCGTTCT TGTCGGAGGC
CGTTACGGCT TGGGCTCAAA AGATACCAGA CCTTCACAAA TAATAGCTGT CTTTAATAAC
CTTAAGAGTG GTACTCCAAA AGATCGTTTT ACTATTGGCA TTCATGACGA TGTCACTCAT
ACATCTCTGC CTGAAGAAGA CATCATTGAA ACAACACCAC AGGGGACTAT CAATTGCAAG
TTCTGGGGGT TGGGCTCAGA CGGTACGGTA GGCGCCAATA AAACCGCTAT TAAAATTATT
GGTGACAATA CCAATCTTTA TGCCCAGGGC TATTTTTCTT ACGACAGTAA AAAATCCGGA
GGTACAACTG TTTCCCACTT AAGATTTGGC AAACAACCTA TACGATCAAC TTATCTGGTC
TATAATGCTG ACTATATAGC CTGCCATAAC AGTTCCTTTA TTTTTCATTA TGACTTACTA
AAAGGCTTGA AGAAAAACGG CACCTTTGTA CTGAACTGCC ACTGGAAAAC CAACGAGCTG
GAAGAGAAAC TACCGTCCTA TATAAAAAGA TACCTTGCTC AAAACCATAT TAACTTTTAC
ATCATTAACG CTATAGATAT AGCATCTGAA ATCGGTCTGG GTGCCAGAAT AAATATGATC
ATGCAGGCCG CCTTTTTTAA ACTGGCCAAT GTGATTCCCC TGGAGAATGC AGTTAAATAT
TTAAAGGATT CTATTGTATC CAGTTATGGG CATAAGGGCC AAAATATTGT AGATATGAAT
AATAAAGCGG TAGACAAAGG TATCTCCTCT CTGGTCAAAG TTGAGGTTCC GGCAGGCTGG
GCTAACGCAG ATGATGAAAA CCAACCCGTT AAGGAAGAAC CTTTTTTCAC TAAGAATTTT
CAAAGACCGA TGGCCAGAAT GGAAGGTGAC GAACTGCCTG TCAGCGCCTT TAAGGGCAGA
GAAGACGGCA CTTTTCCTTT AAGCACGACG GCCTATGAAA AGCGAGGTAT TGCCGCAAGA
ATACCTCAGT GGCAACCGGA GAAATGCATC CAGTGCAACC AGTGTTCTTT TATCTGCCCC
CATGCTGTAG TGAGGCCTTT CCTGCTGAAT GAAGAAGAAG TCAAAAAAGC CCCCTCTTCT
TTTATAACCA AAAAGGCAAC CGGTAAAGGG CTGGAAGGAC TGCAATACCG TATTCAGATA
ACCCCTCTTG ATTGTACCGG CTGCGGAAAC TGTGCCGATG TTTGCCCGGC TCCCGGCAAG
GCTCTGATCA TGAACGATCC GGAAGAGGAA ATTGCCGCAC AGTCAGATAA TTGGGAATTC
GCTCGATTGC TCACCGGCAA ATCTCACTTA ATAGACCACC GGACTGTCAA AGGCAGCCAG
TTTGCCAAGC CCTTATTTGA ATTTAACGGA GCTTGTCCCG GCTGTGGCGA AACCCCTTAC
ATAAAGCTTT TAACACAGCT GTTCGGGGAC AGAATGATGA TTGCCAACGC TACCGGTTGT
TCGTCCATAT ACAGCGCCAG CGCCCCCTCT TTTCCTTATA CTACAACTGC TGAAGGAAAA
GGACCGGCCT GGGGCAACTC TCTGTTCGAA GACAACGCGG AATATGGGTA CGGTATGCTT
CTGGGTGTTA GCCAGATAAG AGAGAGGCTG GCCGATTTAA TGAGAACTGC TCTGGGAGAA
AAATCTGCCG GGGAACTGAA TTCTGACTTA ACCTTAGAAG CAGCACACGG GAAAGCTTCA
GATCAAGTCT TACGGCAAAT TTCACCCGAA GCAGCTGCCG TCCCGCTAAG TGCAGAGCTT
CAAGAGGCCT TTCGGGAGTG GCTGGCAGGG ATGTATGACG GCGAGGCTTC CAAATCTGCT
GCAGCAAAAA TACTTGCGGC GCTAAAAGAC TTTGGTAATG CTGAAAACCA ACTTATAAAA
GAGATTATTG ATAAAAAAGA TTTCTTGATA AAAAAATCTC AATGGATTAT CGGTGGTGAC
GGTTGGGCTT ATGATATAGA CTTCGGCGGC TTGGATCATG TTCTGGCAGC CGGCGAAGAT
GTCAATATGC TGGTATTGGA TACAGAGGTT TATTCCAATA CCGGAGGACA ATCATCAAAG
AGCACCCCCA CCGCTGCTGT AGCCAAGTTT GCCGCAAGCG GTAAAAAGAT CAAGAAAAAG
GACCTGGGCA TGATGATGAT GAATTACGGT TACGTCTATG TTGCCCAGAT ATGTATGGGG
GCTAATATGA ACCAAACTGT GAAAGCTATG GTGGAAGCAG AAAGCTATAA GGGACCCTCC
CTGATCATAG CCTACTCTCC TTGCATTAAC CATGGCATCA GATCAGGTAT GGGCACCAGC
ATAGCTGAGG AGAAAAAAGC AGTTGAAGCC GGCTACTGGC ATATGTACCG CTATAACCCC
ATGCTTAAAG AAGAGGGTAA AAATCCCTTT ATTCTGGATT CTAAGGAACC TAACGAATCC
TATAAAGATT TTATCAAAGG TGAAATCCGC TACTCTTCAC TGTTGAATGC ATTCCCTGAG
CATGCCGAAA AATTGATGGA GGAGTCTGCA AAACAGGCCA GAGAGAGATA CGAAGGCTAC
AAGAAGCTGG CTGAAACAAA ATAA
|
|---|
| Protein sequence | MAKASKTMDG NEAAAYISYP FTEVAAIYPI TPSTPMAESV DLWAAHGKKN FFGQTVRVVE
FQSEAGASGG MHGSLAAGAL TTTYTASQGL LLMIPNMYKM AGELLPAVFH VTARAIATHA
LSIFGDHQDV MSCRQTGVAL LASASVQEAM DLGCIAHLSA IKSRIPFLHF FDGFRTSHEV
QKIEVLDYTE VSKLLDYEAI KEFRDRSLNP EHPSIRGTAQ NPDIYFQGRE ASNPLYDKVP
DIVESYMREI SRITGRDYKP FDYYGAEDAE YVIVAMGSVC ETIDETIDYL RGKGEKVGTI
RVRLYRPFSA QHFFNVLPPS VKSIAVLDRS KEPGSVGEPL YLDIVKSFYN KDKKPVLVGG
RYGLGSKDTR PSQIIAVFNN LKSGTPKDRF TIGIHDDVTH TSLPEEDIIE TTPQGTINCK
FWGLGSDGTV GANKTAIKII GDNTNLYAQG YFSYDSKKSG GTTVSHLRFG KQPIRSTYLV
YNADYIACHN SSFIFHYDLL KGLKKNGTFV LNCHWKTNEL EEKLPSYIKR YLAQNHINFY
IINAIDIASE IGLGARINMI MQAAFFKLAN VIPLENAVKY LKDSIVSSYG HKGQNIVDMN
NKAVDKGISS LVKVEVPAGW ANADDENQPV KEEPFFTKNF QRPMARMEGD ELPVSAFKGR
EDGTFPLSTT AYEKRGIAAR IPQWQPEKCI QCNQCSFICP HAVVRPFLLN EEEVKKAPSS
FITKKATGKG LEGLQYRIQI TPLDCTGCGN CADVCPAPGK ALIMNDPEEE IAAQSDNWEF
ARLLTGKSHL IDHRTVKGSQ FAKPLFEFNG ACPGCGETPY IKLLTQLFGD RMMIANATGC
SSIYSASAPS FPYTTTAEGK GPAWGNSLFE DNAEYGYGML LGVSQIRERL ADLMRTALGE
KSAGELNSDL TLEAAHGKAS DQVLRQISPE AAAVPLSAEL QEAFREWLAG MYDGEASKSA
AAKILAALKD FGNAENQLIK EIIDKKDFLI KKSQWIIGGD GWAYDIDFGG LDHVLAAGED
VNMLVLDTEV YSNTGGQSSK STPTAAVAKF AASGKKIKKK DLGMMMMNYG YVYVAQICMG
ANMNQTVKAM VEAESYKGPS LIIAYSPCIN HGIRSGMGTS IAEEKKAVEA GYWHMYRYNP
MLKEEGKNPF ILDSKEPNES YKDFIKGEIR YSSLLNAFPE HAEKLMEESA KQARERYEGY
KKLAETK
|
|---|
| |