Gene Dtox_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0080 
Symbol 
ID8427002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp85377 
End bp86564 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID645032475 
Productsulfite reductase, dissimilatory-type beta subunit 
Protein accessionYP_003189666 
Protein GI258513444 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID[TIGR02066] sulfite reductase, dissimilatory-type beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.580502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00395825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTAT CCTTAGATAG ACTTGGCAGA TATAATCCCG AAAAAGTACA GGAAAACAGG 
CTGACTGACC TTGGTCCGAG GCATTATTGG GAATATTTCC CTCCTGTAAT TAAAGAAAAT
TACGGCAAAT GGGCTTATCA CGAAGTCCTT GAGCCTGGCG TATTAGTACA CGTTTCGGAA
ACCGGTGACA AAGTTTTTAC CGTTAGATGT GGTGCTGCGC GTTTTATGAC TGTTCAGCAT
GTACGTGAAA TCTGTGCCGT TGCTGATAAG CATTGTGACG GTTATGTTCG TTTTACAACA
CGTAACAACA TTGAGTTTTT AGTGGATAGC TTGGAAAAAG TTGAAGCGTT AAAGGCAGAT
TTAAACAGCC GCAAGTTTGT TTCCGGCAGC TTTAAGTTCC CCATTGGCGG TACTGGTGCC
GGCGTTACCA ACATTGTTCA TACACAGGGT TATATTCACT GCCATACACC GGCAACTGAT
GCTTCCTCCA TGGTTAAGTC GGTTGCTGAC GAACTGTTTG ATTACTTCAC CGGCATGACT
TTGCCTGCTA AAGTAAGAGT ATCCATGGCC TGCTGTCTGA ATATGTGCGG TGCCGTGCAC
TGCTCTGACA TAGCGCTTTT AGGTTATCAC CGCAAGCCTC CTATTATTGA CCATGAAGTT
ATCAGCAAGG TTTGTGAAAT TCCTCTGGCT ATCACCGCTT GCCCGGTTGG TGCTATTTCT
CCGGATAAGA CTGCTGATGG TAAGAAAACA GTAAAAGTTA AAGGCGAACG CTGCATGTTC
TGCGGTAACT GCTACACCAT GTGTCAGGCC CTGCCTCTCT CTGATAAAGA GGGTGACGGT
GTTACCATCC TGGCAGGCGG CAAAATCTCA AACAGAATCA GTGAACCCAA ATTCTCTAAA
GTTGTTGTTC CCTGGTTACC TAACGAATTC CCGAGATTCC CGCAAGTTGT TGAAAACGTT
AAGAAGATTA TTGAAGCTTA CGCTGGGAAT GCTAATAAAT ATGAGCGTCT TGGTGACTGG
GCTGAGCGTA TCGGTTGGGA AAAATTCTTT GAGAAGACTG GCTTAGAATT TACCGAGCAC
CTGATTGATG ATTATCGTCT TGCTTATGAT ACATGGCGCA CCAGCACTCA GTTCAAGTAC
ACTGATGCAG CTTGGGCACT TTCTAGAGCA GCAGGCGATA TAGACTAG
 
Protein sequence
MSLSLDRLGR YNPEKVQENR LTDLGPRHYW EYFPPVIKEN YGKWAYHEVL EPGVLVHVSE 
TGDKVFTVRC GAARFMTVQH VREICAVADK HCDGYVRFTT RNNIEFLVDS LEKVEALKAD
LNSRKFVSGS FKFPIGGTGA GVTNIVHTQG YIHCHTPATD ASSMVKSVAD ELFDYFTGMT
LPAKVRVSMA CCLNMCGAVH CSDIALLGYH RKPPIIDHEV ISKVCEIPLA ITACPVGAIS
PDKTADGKKT VKVKGERCMF CGNCYTMCQA LPLSDKEGDG VTILAGGKIS NRISEPKFSK
VVVPWLPNEF PRFPQVVENV KKIIEAYAGN ANKYERLGDW AERIGWEKFF EKTGLEFTEH
LIDDYRLAYD TWRTSTQFKY TDAAWALSRA AGDID