| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0050 |
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| Symbol | |
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| ID | 8426972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 54120 |
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| End bp | 56735 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645032445 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003189636 |
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| Protein GI | 258513414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0971682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000571287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAAGAT TCAAATTCCC TCTAATTTAC ATGATTGTTT TTTTATTACT CATCGCGGGG
ATCATGCTAA CCGATTTATT AAATTATCAC AGTCAACAAA ATAATATTAT GATTAACTCG
TATTACCCGA TCATTATTCT CTTAATAGTT ACTTTTATCA GCCTAATAAT TTACCTGGTC
TTTCCAGAGC AAATTTATAA GTTTTACCCA CTGTCAATGA AGAATGTATT GTTAAAATAT
GCTAATGATA TATTGTTTTT GTTTGACTGT GATTTTAATT TTATCGAAAT CAATGATAAA
GCCATCAAAA CATATGGCTA TTCCCACAAA GAATTTCTTA AGATGAAATT TCATGATTTA
ATTGATCATA ATAAATGTCC TCAATTTAAT GAAATATGCA AAAAGATAGA TTCTTATCAC
GGTTATATTT ATGAAACAGT TCATCAACGA AAAGATGGCT CCACATTTCC TGTAGAAATT
AGTTCCCGCC CGATTATTGC CGGTAGGAAA AAATACTATC ATTCCATTAT TCGCGATATA
ACTGTGCGCA AACAGGTAGA AGATCAATTA CGTCAGGCTA ATTTGGATTT AAATACTAAA
ATTAAAGAAC TCCTCCATTC GGAAGAGAAA TTTAATAAAG CCTTCCACGC CAGCCCGGTC
ATTATGTCCA TTTCTACCTT AAAGGACGGT CGCTACATGG AAATTAATGA TTCTTTCGTT
AGATTGCATG GTTACAGCCG GGAAGAAATT ATCGGCCGCA CCGCGCTTGA AATTGGTGCC
TGGAATGACC CCTGCGATCG TGATATAGTA GCGCAGCTGT TAAATGAACA AGGTTATGTA
AAAAACTTGG AGGTTAATTA CTTTACTAAA GCACGTGAAC TGCATACTGG CTTGCTCTCC
ATAGAGCTTA TCAATTTTGG CGGTGAACAA TGCCTGATTG CCATCATGCA TGATATAACT
GATCTCAAAC GGACAGAAAA ACAGCTGCAA CAAAGTAAAC AGGAATTAAC GACGCTCTTA
GAAAATATTC CGGATATAAT TTCCCGCTTC GATCGCAACC TGAGATACCT TTATGTAAAT
CCGGCCGTAA CGCAGGCAAC CGGACTTCAT CAAAACTGCT TTATCGGAAA AACCAATCGT
GATCTGGATA TGCCGGAAGA ACAGGTACAT ATATGGAACA GAGCATTGGA AAAGGTATTT
ATGACCGGCA AAAACCACAT TATAGAATTT TACTACCAGT TAGCCGATAA ACAAAAACAT
TTTGAATCAC GCCTGATACC TGAAAATTCA CCGCAGGGCG AAGTGGAATC AGTACTGGTA
ATTTGCCGGA ATATCACCAT GCGCAAGGAA ATGGAACACA GGTTGACCAC ATACCAGGAG
CAACTGGAAA ATATGGTTTA TAAGCGCACC TTGGCACTAA AAAAGAGCAA TGAGCAGCTT
AAGCAGGAAA TAATTGAACG TTTGCAAGCT GAGACGGCCC TCCAGCAAAG CGAAAGAAAA
TACAGGGCAC TGTTTAACAA TACAAATGAT GCCATATTAT TACATGGGAT TTCAGGCAAT
AACTCTTTCG AAAGCATTAT AGAAGTTAAT GACGCTGTCT GCCGCCGCCT GGGCTATACC
CGTGAAGAAC TGACGCAATT GTCACTGGCT GATATTTATG CTCCGGAAAG CCGTCGATTA
CTGCCAAATA TTCTAAATAT TATTTTAAAC CGGAAACACT TGACCTTTGA AGTAATACAC
ATTACTAAAA CCGGTCAAAA AATACCGGTT GAAGCGGCAT CTCATTTATT TACCTTAAAC
GGCAAAAAAG TAATCCTGTC TGTAATCCGA GATATTACAG AGCGCAAGCG TGCGGAAGCT
GAATTACAAG AAGCCCGTCA GCAGGCGGAA AGGCTGCAAA CCATGGCTTC CCTTGCCACT
ATGACAGCAG GCATTGCCCA TGAAATCAAC CAACCACTGA ACTCCCTAAA AATTATGGTG
GACGGGTTGC TGTTTTGGCA TGATCGAAAC GGAACTCTTG ACGAGAATGA ACTAATTGAT
GGACTGAAAA ACATCTCTGC TCAAGCAGAT CGCATCAGCT TGATTATTAG ACGTATGAAG
GCTCTGGTTC GACATGAATC ACCCCCAAAT CTCTACCCCT GCAATCTCAA CAGCGCTGTA
GAAAAAGCTA TAGTTACAAT GCATGCTCAA TTGCTGGCAT CCAATATTAA ATTGCGAAAT
ATATTACAAA ACCCATTGCC GCCGCTTTCC GGAGAAAATT TTGGACTGGA AGAGGTGATT
GTCATCCTGC TGGTTAACGC CATACAGGCA CTTAATAACA GTAGACAAAT AGATAAAGAA
ATACTCATTA CCACACGTTC TGAAAGATAT ATTATTCTGG AAATAAGTGA TAATGGCAGC
GGAGTGCCAA CAGATTTACA AGAGAAAATT TTCGAACCTT TTTTTACTAC CAAGGAAGTG
GGACAGGGTA TGGGTTTGGG ACTTTCTATT GCCCATACCA TAATAACATC TTTCCATGGG
CAGATTTCAC TCAGGACAAA TGAAAAAGGA GGAACTACCT TTCAACTGGA TTTTCCTGTT
TACAATAATG ATTTAATAGA GGAGGTTGGG CTATGA
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| Protein sequence | MSRFKFPLIY MIVFLLLIAG IMLTDLLNYH SQQNNIMINS YYPIIILLIV TFISLIIYLV
FPEQIYKFYP LSMKNVLLKY ANDILFLFDC DFNFIEINDK AIKTYGYSHK EFLKMKFHDL
IDHNKCPQFN EICKKIDSYH GYIYETVHQR KDGSTFPVEI SSRPIIAGRK KYYHSIIRDI
TVRKQVEDQL RQANLDLNTK IKELLHSEEK FNKAFHASPV IMSISTLKDG RYMEINDSFV
RLHGYSREEI IGRTALEIGA WNDPCDRDIV AQLLNEQGYV KNLEVNYFTK ARELHTGLLS
IELINFGGEQ CLIAIMHDIT DLKRTEKQLQ QSKQELTTLL ENIPDIISRF DRNLRYLYVN
PAVTQATGLH QNCFIGKTNR DLDMPEEQVH IWNRALEKVF MTGKNHIIEF YYQLADKQKH
FESRLIPENS PQGEVESVLV ICRNITMRKE MEHRLTTYQE QLENMVYKRT LALKKSNEQL
KQEIIERLQA ETALQQSERK YRALFNNTND AILLHGISGN NSFESIIEVN DAVCRRLGYT
REELTQLSLA DIYAPESRRL LPNILNIILN RKHLTFEVIH ITKTGQKIPV EAASHLFTLN
GKKVILSVIR DITERKRAEA ELQEARQQAE RLQTMASLAT MTAGIAHEIN QPLNSLKIMV
DGLLFWHDRN GTLDENELID GLKNISAQAD RISLIIRRMK ALVRHESPPN LYPCNLNSAV
EKAIVTMHAQ LLASNIKLRN ILQNPLPPLS GENFGLEEVI VILLVNAIQA LNNSRQIDKE
ILITTRSERY IILEISDNGS GVPTDLQEKI FEPFFTTKEV GQGMGLGLSI AHTIITSFHG
QISLRTNEKG GTTFQLDFPV YNNDLIEEVG L
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