Gene Dtox_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0049 
Symbol 
ID8426971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp52663 
End bp54123 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content41% 
IMG OID645032444 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003189635 
Protein GI258513413 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00627609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATAC TGTTGGTGGA GGATGATCTG GACAGTCGCC TTTATTTAGG TCAATTTCTC 
CGGAAACTTG GTCACCGGAT TGTTGAAAGT GAAGACGGCG AAGACGCTTT AAGTAAATTC
CCAACCGGAC AGTTTAATTT AGTAATATCC GATATAAGGA TGCCCAAAAT AAGCGGGCTG
GAACTGCTGC AAACTATAGT CCACCTGCCA GCCGGCCGGG ATACAGATAT AATACTCTTT
ACCGGTCATG TCGATGTGAG TCTGGCAATA GAAGCTCTAC GGGCAGGAGC ATATGATTAT
TTACTGAAGC CAATAAATGT CAACGAATTG ACAGCAGTGA TTCAGCGGGT ATCTGAGCGC
CAATCCCTGC TCCGGGAAAA CAAAATTGCA AACAATAAGT TTAAGAAAGA AAAAGCTGCT
TCCCAGGCCA CGCAAAGGGA GTTGGAATTA CTGAAAACTT CCTATGTCAG AGAAATTAAA
CGGGAAGAGG TATTTATTTT CTCGAAAAAA ATGAAACAAA TTTATACGCA GGCAGAAAAT
TTTCAACTTG ATACATCCCT GCCCATTTTA ATTCAGGGTG AAACCGGTAC AGGAAAAGAG
ATTTTAGCAA AATATATACA TTATTACCAT TCTAAAAATG AGAGGCCTTT TATTGATATT
AATTGTGCCG CCATGACTTC CGGCATTTTT GAAAGCGATT TATTCGGTTA TGAGGCCGGT
GCTTTCACAG GTGGACTGCC TAAAGGACAA AAAGGCAAGC TGGACATTGC CCAAGGCGGA
ACAGTTTTTT TTGATGAAAT AGGGGAACTG TCAGTAGACT TACAAGCTAA ATTACTGCGT
TTTATTGAGG AAAGAGAATT TTACCGGGTT GGCGGACTTA AAAAAATAAA ATCCAATGTC
AGAATTATTT GCGCTACTAA TGTGGACATC CCAAAACAGA TACAGCAGGG GCTATTCAGA
TCAGATTTAT ATTACCGCCT TAATATCGGC CACTTCATAA TTCCCCCCTT GCGGGAGCGA
CCAGAGGAAA TTCTGCCTAT GGCCAATATT TTTTTGAATA GGCTTGCTCG CCGCCGGGGC
AAAAGATTTA AAAATATTAG TAAAAAAGCC GCTAAGTTAT TAATAACCTA CCATTGGCCC
GGCAACGTCA GGGAATTAAA AAACGCCATA GAGTGGATCA CTTTCACACA TGATGATTCG
GAAGTGCGTA CTGAACACCT GGATAGAATT ATTAGATCCG CCTCAAAACC TGCTGAAACC
AATAATAACC ACAGCTTATC CGGAGAAATA GCGGAATTTA AGCTGCCACG AGACTTTTTT
GATATTGAAA CATTCTATAA TGAAGTAGTG CGACAGGCTC TGGAAATGCA CAAGGGAAAC
AAAGCCAAAA CCGCTTCCTA CCTGAGAATG TCCAGACACA GCTTGTATAG CTGCCTAAAG
CGTATGGAAG TAGACAAGTA A
 
Protein sequence
MNILLVEDDL DSRLYLGQFL RKLGHRIVES EDGEDALSKF PTGQFNLVIS DIRMPKISGL 
ELLQTIVHLP AGRDTDIILF TGHVDVSLAI EALRAGAYDY LLKPINVNEL TAVIQRVSER
QSLLRENKIA NNKFKKEKAA SQATQRELEL LKTSYVREIK REEVFIFSKK MKQIYTQAEN
FQLDTSLPIL IQGETGTGKE ILAKYIHYYH SKNERPFIDI NCAAMTSGIF ESDLFGYEAG
AFTGGLPKGQ KGKLDIAQGG TVFFDEIGEL SVDLQAKLLR FIEEREFYRV GGLKKIKSNV
RIICATNVDI PKQIQQGLFR SDLYYRLNIG HFIIPPLRER PEEILPMANI FLNRLARRRG
KRFKNISKKA AKLLITYHWP GNVRELKNAI EWITFTHDDS EVRTEHLDRI IRSASKPAET
NNNHSLSGEI AEFKLPRDFF DIETFYNEVV RQALEMHKGN KAKTASYLRM SRHSLYSCLK
RMEVDK