| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0045 |
|---|
| Symbol | |
|---|
| ID | 8426967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 46902 |
|---|
| End bp | 48671 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645032440 |
|---|
| Product | indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| Protein accession | YP_003189631 |
|---|
| Protein GI | 258513409 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
|---|
| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0266791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC TGCTATCCGG TAATGCGGCT ATAGCACGTG GTGCTTATGA GGCCGGAGTG
AAGCTGGGTG TCGGCTATCC CGGTACACCT AGCACAGAGA TTTTAGAGAA TTTCGCTAAA
TATGAGGGTA TTTATGCCCA GTGGTCACCG AATGAGAAAG TAGCTTTGGA AGTTGGTATA
GGTGCTTCTT TAGCCGGGGT TAGGGTTCTG GTTACTATGA AACATGTGGG TGTTAATGTT
GCTGCTGATC CCCTGTTAAC TTTTGCCTAT ACAGGTGTGA ACGGTGGTTT GGTGCTGCTT
TCTGCTGATG ATCCCGGTAT GCACAGCTCA CAAAATGAAC AGGACAATCG TATTTTTGCC
AAATTTGCCA AAATACCTAT GCTGGAGCCG TCTGACAGCC AGGAAGCCAA AGATATGGTA
GGGCTGGCTT TGGAAATCAG TGAAAAGTAT GACACCCCGG TACTGTTGAG AACGACTACC
AGAGTAGCTC ACTCTCAAAG TATGACGGAA ATTGGGGAGC GCCGTGAAGT TATTGATAAA
CCCTATCAGA AGAATGCCCA GAAATATGTT ATGGTGCCGG GGCATGGACG TATGCGCAGG
TACTTTATTG AGAACAGGAT GAAAGACTTA GCTGAGTATA GTGAAAAAAC TCCGGTTAAC
TTTACAATTC CCGGTGACCA AAAAATTGGT GTTATTACCA GTGGAATCAG CTACCAGTAT
GTGCGTGAAG TGCTGCCAGA TGTTTCGGTG TTAAAGCTGG GAATGACTTT TCCTTTACCG
GAACAAATGA TCAAAGATTT TGCCGGTCAA GTGGAAAAAC TCTATGTTGT GGAAGAACTG
GAGCCTTTTA TAGAGGAACA ATTAAAGATA TGGGGCATAG AAGTTTTAGG TAAACAGGTA
TTCCCTTCTA TTGGTGAGTT CAGTGCTGAT TTAATCAGAC AAAAATTTGT TGATGAAAAA
ATTATTGATG CTTCGGAGAA GATTGCTGCA GTGCCTGAAC AAACCGCGCC TGCAACTCCG
GTGCGTCCTC CGGTGCAGTG TCCGGGTTGC CCGCACAGAG GGGTTTTCTA TACGTTAAAC
CGTTTGAAGC TGGTGGTTAC CGGAGATATC GGCTGCTATA CTTTAGGTGC TTTGCCGCCC
TTGCAGGCTA TGGACACCAC AGTTTGTATG GGTGCCAGTA TCAGCATGGC ACTGGGAATG
GAAAAGGCTG TGCCCGAGAT GAAAGGAAAA ACCGTGGCTG TTATTGGTGA CTCAACCTTT
TTTCACTCAG GCATTACCGG CTTAGTGGAT GTGGTATATA ATCAGGGCAA CAGCACGGTT
ATTATTCTTG ATAATCGTAC TACTGCCATG ACCGGTCACC AGGAGAATCC CAGCACGGGG
ATAAATTTAA TGGGGCAGCC GGCGCCGGTT ATTGATATTG AGAAATTAGC GCGTGCTTTG
GGTATTAACA GGGTAACCAA GGTCGATCCT TTGAGTTTGG AAGAATTTAA AAACGTTGTC
CAGCAAGAAA TTGCTGCCGA TGAGCCTTCG GTAATTATTG CCCAGCGACC CTGCGAGTTG
TTGGTAAAAG AAAAGGCTGC TCCTTACGTG GTTGATCCTG ATGTTTGTAA AGGGTGTAAG
CAGTGCCAGC GTTTGGGTTG CCCGGCTATG TCCTTTAATA AATTGGAAAA GAAAGCTGTT
ATCGATATAA TTACCTGTGT AGGCTGCGGT CTCTGTGTTC AAATATGTAA ACACGGGGCT
TTGCGTCAGG GAGGTGAGAG AAATGAGTAA
|
|---|
| Protein sequence | MKDLLSGNAA IARGAYEAGV KLGVGYPGTP STEILENFAK YEGIYAQWSP NEKVALEVGI
GASLAGVRVL VTMKHVGVNV AADPLLTFAY TGVNGGLVLL SADDPGMHSS QNEQDNRIFA
KFAKIPMLEP SDSQEAKDMV GLALEISEKY DTPVLLRTTT RVAHSQSMTE IGERREVIDK
PYQKNAQKYV MVPGHGRMRR YFIENRMKDL AEYSEKTPVN FTIPGDQKIG VITSGISYQY
VREVLPDVSV LKLGMTFPLP EQMIKDFAGQ VEKLYVVEEL EPFIEEQLKI WGIEVLGKQV
FPSIGEFSAD LIRQKFVDEK IIDASEKIAA VPEQTAPATP VRPPVQCPGC PHRGVFYTLN
RLKLVVTGDI GCYTLGALPP LQAMDTTVCM GASISMALGM EKAVPEMKGK TVAVIGDSTF
FHSGITGLVD VVYNQGNSTV IILDNRTTAM TGHQENPSTG INLMGQPAPV IDIEKLARAL
GINRVTKVDP LSLEEFKNVV QQEIAADEPS VIIAQRPCEL LVKEKAAPYV VDPDVCKGCK
QCQRLGCPAM SFNKLEKKAV IDIITCVGCG LCVQICKHGA LRQGGERNE
|
|---|
| |