Gene Dtox_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0042 
Symbol 
ID8426964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp43421 
End bp44719 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content47% 
IMG OID645032438 
ProductPhenylacetate--CoA ligase 
Protein accessionYP_003189629 
Protein GI258513407 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.125903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGG ATCCAGATGT GGAATGCATG GACCGGGAAG CAATGCAGTC TTTGCAGCTG 
CAAAGACTGC AGGAAACAGT GAGAAGGGTA TTTGACCGGA TCCCTTTTTA CCGGGAGAGT
TTCACTGCTG CCGGTGTAAA ACCGGCTGAT ATTCAGAAAT TAAAAGATAT AGAAAAGTTG
CCGTTTACTG TAAAAAATGA TTTGCGGGAT AATTACCCTT ATGGCCTTTT TGCCGTACCT
CTGCAGAAAA TTATAAGGCT GCATGCGTCT TCCGGCACAA CGGGAAAACC TATTGTGGTT
GGTTACACAA AAAAAGATAT TGAAACCTGG ACAGAGTTGG TAGCCAGGTT GGTAACTATG
GCTGGTGTTA CGAGTGATGA TGTGGCTCAG ATAACTTTTG GCTACGGTCT TTTTACAGGT
GCTTTTGGTT TGCATTATGG ACTGGAGAGA GTGGGCGCGA CTATTGTGCC GGCCTCTACC
GGCAATACAG AAAAACAGGT TATGTTGATG CAGGACTTCG GTACCACTGC TTTGATCGGT
ACGCCTTCTT ATGTGCTGCA CCTGGCTGAA TCAGTTGCCG CATTGGGAAT AGACCCTTCC
GAAATGAAGC TGCGCGTTGG AATGTTTGGT TCAGAGGTTT GGAGTGAAAG TATGCGCGCT
CAGATAGAAC GGGCCTGGGG TATAAAGGCT ACTGATAACT ATGGCTTGAG TGAAGTTATG
GGGCCCGGAG TTTCCGGTGA GTGTTCCTTT GCCAATGGAT TGCATATCGC GGAGGATCAT
TTCCTGCTGG AAATCATTGA TCCCGATACC GGTGAAGGTT TGGATTACGG GCAGGAGGGT
GAGGTGGTTA TTACTACCTT AACCAAGGAG GGAATACCTC TGATTAGATA CCGTACCAGG
GATATTTCCG TAATCAACAC GGCTCCCTGT GAGTGTGGCA GGAGTTCGGC CCGCCTGCGT
AAAATTGGCG GCAGAACCGA CGATATGTTG ATTATTTCCG GTGTAAATGT TTTCCCATCG
CAGATAGAGA GCGTGATTAT GAATATCGAA GGCGTTGCAC CTCATTACCA GATAGTAGTT
GGCAAAAAAG GTTATTTGGA TTACCTGGAA GTGCAGGTTG AGATAGCTCA GGAAAGGTTT
ACAGGTAACT TTAAAGACCT TGAGGAGTTG GAGCAAAAGA TACGCCGCCG TCTGCATAAT
GTGCTCTCCA TCAGTCCCAG AGTACGTCTT ATGGAACCGC TTTCTATTGA GCGCAGTGTT
GGCAAGGCCA AGAGGATTAT TGACAACAGG CCTAAATAA
 
Protein sequence
MIWDPDVECM DREAMQSLQL QRLQETVRRV FDRIPFYRES FTAAGVKPAD IQKLKDIEKL 
PFTVKNDLRD NYPYGLFAVP LQKIIRLHAS SGTTGKPIVV GYTKKDIETW TELVARLVTM
AGVTSDDVAQ ITFGYGLFTG AFGLHYGLER VGATIVPAST GNTEKQVMLM QDFGTTALIG
TPSYVLHLAE SVAALGIDPS EMKLRVGMFG SEVWSESMRA QIERAWGIKA TDNYGLSEVM
GPGVSGECSF ANGLHIAEDH FLLEIIDPDT GEGLDYGQEG EVVITTLTKE GIPLIRYRTR
DISVINTAPC ECGRSSARLR KIGGRTDDML IISGVNVFPS QIESVIMNIE GVAPHYQIVV
GKKGYLDYLE VQVEIAQERF TGNFKDLEEL EQKIRRRLHN VLSISPRVRL MEPLSIERSV
GKAKRIIDNR PK