Gene Dtox_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0021 
Symbol 
ID8426943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp22461 
End bp23162 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content40% 
IMG OID645032417 
ProductLrgB family protein 
Protein accessionYP_003189608 
Protein GI258513386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT TTTTTATTTC TCCACTGTTT CTTGTGGGGT TAACACTAGC CTGCTATTTT 
GTCTCACTTT CTTTTTATAA AAAATATAGG CTGCTCTTAT TTCACCCGGT ACCTTTGTCA
TCATTAATAA TTATTCTTTT CTTGTATAAT AGAGGGATAA ATTATATTAC CTATGAAAAA
GCAACAGGGT TTATTTCATT TTTTTTGGGA CCTGCTACAC TGGCTTTAGG TTATAATTTA
TACCGGGATT TTTCCATGAT TCGGCGTAGA GTATGGCCCA TTTTATTGGG TTCCTTTTGC
GGAGCCATTG CGGGTGTTTT TTCCGTATAT ATTCTGGGCA AGCTGCTCTG TATTAATCAA
TCAATTATCT TTTCTTTTTT GCCTAAATCA ACCACTACAC CAATAGCTCT GGCTATTGCC
ACTAAATACG GGGGTATCGG CTCGTTAACG GTTGCTGCTG TTGTTGTAAC CGGTATTTTG
GGAGCCCTGA TTGGCCCGGA ATTTCTTACT CTAACCGGTA TTAGGGATAA TACTGCCAGA
GGGCTGGCTA TGGGCAGCGC TGCCCATGCC ATAGGAACCA GCCGGGCTCT CCAGGAAAAC
AGCGAACAGG GCTCCCTGGC TGGTTTGGCA ATTATTCTTT GCGGACTTTT TACAGCTTTG
ATTATCAGTA TGATTAATAT ATTTAAAGAG TACATATTTT AA
 
Protein sequence
MDKFFISPLF LVGLTLACYF VSLSFYKKYR LLLFHPVPLS SLIIILFLYN RGINYITYEK 
ATGFISFFLG PATLALGYNL YRDFSMIRRR VWPILLGSFC GAIAGVFSVY ILGKLLCINQ
SIIFSFLPKS TTTPIALAIA TKYGGIGSLT VAAVVVTGIL GALIGPEFLT LTGIRDNTAR
GLAMGSAAHA IGTSRALQEN SEQGSLAGLA IILCGLFTAL IISMINIFKE YIF