| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4199 |
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| Symbol | |
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| ID | 5714700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | - |
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| Start bp | 45953 |
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| End bp | 46597 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641277094 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001542390 |
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| Protein GI | 159046722 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.680761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGG AAGCGAAGGC AGGTCAGGCG GCGTTCGACA GTGCCGCGAC CCGGCAGCGT
TTGCCCCCGA AAGAGCGCCG GGAGCAGATC GTGGCGGAGG CGGTGCGGTT CTTTGCCGAT
GTCGGGCTGG ACGGGAACAC GCGGGATCTG GCCAAGCGGC TGGGCGTGAC GCAATCCCTG
CTGTTTCGGT ATTTCAGCAC CAAGGACGAG CTGCTGGAGG CGGTCTATGG CACGGTCTAT
CTCGACCGGT TGTCGCCGGA CTGGCCCGAG CGGCTCTGCG ACCGGGGGGT GCCGCTGCGG
GCGCGGCTGA TCGCGTTCTA TTCGGAATAC AGTGCGCTGA TCTTCCAGCG GGAGTGGATG
CGGATCTTCA TGTTCTCGGG GCTGGCGGGC GCGGCGCTCA ACCGGCGCTA CCTGGAGCAT
CTGGGCGAGG TGATTCTCGG CCCGCTGCTG GAGGAGACCG CGCGGCTGAC CCGGACCGCG
CGGCGGCCGA TCATGGAGGA TGTCTGGGAC CTGCACGGCG GGATCGTCTA TATCGGGATC
CGGCAGCATA TCTATTCGAT GCCCGCGCCG GACGATCCCG AAGAGGCGAT TGCCCGGGCC
ATCGACAAAT ATCTCGCGGC CTTCGGGATC GGTCCGCAGG ATTGA
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| Protein sequence | MNTEAKAGQA AFDSAATRQR LPPKERREQI VAEAVRFFAD VGLDGNTRDL AKRLGVTQSL
LFRYFSTKDE LLEAVYGTVY LDRLSPDWPE RLCDRGVPLR ARLIAFYSEY SALIFQREWM
RIFMFSGLAG AALNRRYLEH LGEVILGPLL EETARLTRTA RRPIMEDVWD LHGGIVYIGI
RQHIYSMPAP DDPEEAIARA IDKYLAAFGI GPQD
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