| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4110 |
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| Symbol | |
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| ID | 5714611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009958 |
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| Strand | + |
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| Start bp | 39815 |
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| End bp | 41992 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641277012 |
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| Product | hypothetical protein |
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| Protein accession | YP_001542308 |
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| Protein GI | 159046639 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0308916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CCTTGGAAAA ACTTCTGCCG CCCTGCCCCG TCGCGCGGAA ACAATTTGCT
GCCGAAGGGC GCAGGTTGCT AAATCTGCTG CCGGACTATG CCGCCAAGAG CAAAGTGGAG
GCATGCTTCA CGCGATTATT TGCTGGGCAC GAGGTGGAGA ACGTTTCCCT CGAGAACGCT
CGGCAAGCGA TCCACCGTAA GCTGAAAACC TACCCGCTTG GTGATCTTCT CGGACACAGG
CCAAGCGAGG CTCAATCCAA AGCGCCGTCT ATCGATATGC TGCGCGCCTG GGTATTCGCC
GGCGCGCTCC ACGCGATCGA TGACGAAGAC CAGTGCCATA CGGCGTGGGC GTTTGCGGTC
AGGGCGGTTC GTAAACTGGC GATGGATCAG GCATGGGGCG GTGAGCGTGC TCGGCTCCCC
TCTGTCCTAG ACCTCAGCCT TTGGCAGGTA CGACAGACAC TAAACGCATG GGAAGGGCGC
GAACGTACGG TCGGCAATGC GCATGCTGGT CAAATCGAAG ACATCAGGCG CCATCTAGAT
CATCTGGCGG GGAGCCCACG GCGACATGTG GGCGACGTCA CCCGCAAGGC CGCCAAGCGT
AGCCAACGCT TGGCGGCAGA GCTGACAGCA CCTTGCGCGC TGTCTGCAGA CGTCCCGGTT
CAGCCTGTTC TCGACCTGGT CCAGCACGAC CATGACGACG CGCCGCTGGT CACTTTGGAA
GAAGCGGCAG ATGTGGCGGA GGTGACTTGG TTGAAGTCCA CCCACGAGAA CCTTGACGAT
GTGATCGAGG ACCTGCTTGA GACCGAAGCC CCTGTGTCGG CCATGACGGC GTCGCGGCAT
CTGACACATG AAGAGGCCCG CGCGCTCGCC CGAGATCTCC GCAAGGCCAT CGCCCACGGC
GCAGAGCCCG GTGTTGTCAT GCTCGCCATG AGTCTATGCC TCGGCAGCAG CTTCGAGATG
CTTGTGCGCC TGTCGAAGAG TGTGCCAAAG GTCGCCGGCA CCCCATGGTG GCATGTGTCG
GGCGAAAAGA TGGGACTTGC ATTCGCACCT GCTGTCACAG GCGCGCCAAA GCCCGCCAGC
GGTGGGTTTG TTATCATGCT GCCCACGTGG CTTGCCACCG CAGCTCACAA GATCCTGGAG
GGAGACCTCG ACCTCGATGC TTTCGAAGGG CAAGCCAAGC AATGGTTGAA GCGGCGGCCC
GGTCGGGCGC AGCGTCTCAG CCGAGTTGCC CAATGTCTGC CTGCGGCCCT GAAATCGGTC
GGCATTGATG CGGCCCTTGC AGGACTGCTA ACGCGCCAAG ACATCCGGAC ATGCCCACAG
ATATACTACA CGCTGGTGAC GGCGCCCCAA CTGGACCGGG TCTATGCCGA GTTCCAGACC
AATTGGCTGG GTGATACTGA GCGTGAAACG GCTGTTTGCG CCTTGACCCG TTCCAACAAC
CGGATTGGTT CACGTCGGGT ACCATCGCGT GAAGCCGTGG CGACGTTTTT CTCCGAGCTG
GACCACCAGC TCGCTGATGC GGAAGAGTGC CTTACCACCC GGCGACCCTA TGCCGTCCAC
CAGTTGCACT CAGCATTAGT GAACAAGGTC GCGGGCATCG TCGCCTTCAC AACTGCAATG
CGACCCCACG GCGAAGCCTG CTCATCCTTT CGCCAGATGA TCCTCGAAGG TCCCTGCCCC
ACCATGCGGC TCGAGGATAA GGGCAACCGA CAAGTAGATG ACGCACGTTG GCTACCTATA
CCAAGACTGT TGGCTGAAAC TTTCTGCGCC CTGCGGGACC ATCTGGAAAA CCTGCACCCA
TGGGCGAGCA TCACATCGCC GGACCTTGCG GCCCATATCG ATGCTTCGCT CAAGGGGCAG
TGCGCGCCTT TGTGGTACAT CCCTGAATGC ACAGACAAGC CGGAGGCCCT GAAATCCTCT
GACTTCTGGA AGGTCCACAA GCAACGGCGG CAAGAGCGGA ACATGTTTCG CCACTACTGG
CGCACCCGGC TTGTCGCCTC GCACACCCCC GGTTGGATGA TTGACTACTG GATGGGACAC
GGCGGCTGGC AGGCTGCGCA GTATTTGCCC CTCGGCGCCT ACCAAGCACG TGATCTGAAG
AGCCTAGCCG ACACGATTGA CGAGCATGCG GCGGATCTTG GTCTTCACGC CCCCGAGGTA
CGGAGGCTGC CGCAATGA
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| Protein sequence | MSDPLEKLLP PCPVARKQFA AEGRRLLNLL PDYAAKSKVE ACFTRLFAGH EVENVSLENA
RQAIHRKLKT YPLGDLLGHR PSEAQSKAPS IDMLRAWVFA GALHAIDDED QCHTAWAFAV
RAVRKLAMDQ AWGGERARLP SVLDLSLWQV RQTLNAWEGR ERTVGNAHAG QIEDIRRHLD
HLAGSPRRHV GDVTRKAAKR SQRLAAELTA PCALSADVPV QPVLDLVQHD HDDAPLVTLE
EAADVAEVTW LKSTHENLDD VIEDLLETEA PVSAMTASRH LTHEEARALA RDLRKAIAHG
AEPGVVMLAM SLCLGSSFEM LVRLSKSVPK VAGTPWWHVS GEKMGLAFAP AVTGAPKPAS
GGFVIMLPTW LATAAHKILE GDLDLDAFEG QAKQWLKRRP GRAQRLSRVA QCLPAALKSV
GIDAALAGLL TRQDIRTCPQ IYYTLVTAPQ LDRVYAEFQT NWLGDTERET AVCALTRSNN
RIGSRRVPSR EAVATFFSEL DHQLADAEEC LTTRRPYAVH QLHSALVNKV AGIVAFTTAM
RPHGEACSSF RQMILEGPCP TMRLEDKGNR QVDDARWLPI PRLLAETFCA LRDHLENLHP
WASITSPDLA AHIDASLKGQ CAPLWYIPEC TDKPEALKSS DFWKVHKQRR QERNMFRHYW
RTRLVASHTP GWMIDYWMGH GGWQAAQYLP LGAYQARDLK SLADTIDEHA ADLGLHAPEV
RRLPQ
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