Gene Dshi_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4109 
Symbol 
ID5714626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp39318 
End bp39818 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID641277011 
Producthypothetical protein 
Protein accessionYP_001542307 
Protein GI159046638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0641165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA GTACCCGCTC CGGCGGCATG GCACCGCTAT GCCTGCGTCC GCTCCCGAAG 
AACGCACGGT GGATCCCAAA CACCAAGCTT GCTCTCCACC CCCTCGCAAC GCCCGCGTTT
GAGACATATC GCAACATCCG TGTATCCGCG CGGATCAGCC CGTCTTTGGC CGATCCTCTC
CTCGTGGTGC GCAGTGACCA AGGGCGAGCA CTATTTTTTG GCAACTTCGC CGCGCGCATG
GTTTTTGCCG ACCATGAAAC GATGCCCGTG ATTGTTTTCG ACGGGCTCGA GGGCGCGGAC
ATCACGCGCT TTGCTTGGGC CGAAATCACC AAGCTTGCCT TCAACCAGTT GCATCCAAGA
GGTGGGTTCC AGGACCTCAA GCGCGCCCTG CTGTTGTCTC CGGAAGACGT TACAAAGACG
GCAATTGGCC AGATCGGCGA TGCTGCACTT GCACGTCATC TCGCAGTGGA TGTGAGCCGT
TTCCGGGGGG CGCAGCGATG A
 
Protein sequence
MTQSTRSGGM APLCLRPLPK NARWIPNTKL ALHPLATPAF ETYRNIRVSA RISPSLADPL 
LVVRSDQGRA LFFGNFAARM VFADHETMPV IVFDGLEGAD ITRFAWAEIT KLAFNQLHPR
GGFQDLKRAL LLSPEDVTKT AIGQIGDAAL ARHLAVDVSR FRGAQR