Gene Dshi_4107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4107 
Symbol 
ID5714614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009958 
Strand
Start bp36463 
End bp37227 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID641277009 
Producthypothetical protein 
Protein accessionYP_001542305 
Protein GI159046636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.408855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGTCG CTGACATGGT GACCTCGCGG TATGATGGAA TCCGATTGCA GGACGTGACG 
GACGAGTTCG CCTGTGATCA CCGAACCGCA CAGCGCATGA TGCGTGCTTT TGAAGCAGTG
TTTCCTCAGG TTAGCGTTAC CGAAGATGAT CAGCGCCGCC GCCGCTGGCA TTTGCCCCGC
AGTGATCCTC GATGGCTGCA GGCCCAAGGA CTACGTGACA GTGAATTGGC CGCACTCGAA
ATGGCAGAGA AACGCGCGCT TCGCGATGGC GCGCTCGAAG ATGCAAAAAA CATCCGCGCT
TCCGCCATCG AAAAATATGC TGACGCCTTG CGAAGGATCT CGTTCGCCTG GCGCAGCTCG
CGGTTCTCCC GCTCTAAGGC CTTCAGCTTC TCAGCCATCT CGGTCGAAAT ACTGGCGCGA
TCTCCGCGAT CAACCTCGGC CTTCTTGACC CATTTGTTCA GCGTCTGGGG AGCGCACCCG
ATCTTCGAGG AAATCGACAA GATCGCTCCT CTCGGGACAT TGCCATGCAA TGCCCTGCCG
TGCAGTGGAC CAGCGGCTCT CATGCTGCCC GGGATTGTCC AGAACCAGGC GAACGGCACG
CTCGCGTACG TCGGGGGAAC ACTTGTTCGT CGTCTTGCTC ATGATGCTTC GTCCTGCTCA
GGAGTTGAAG CCTCCGGCAA ACCCGGCGCG GTTCAGTGGC AGGTCACCGT TTCTTCACAA
GCCTCCGCCG TGCCGCGTTT TGCATCGCGG TGGCCTGTCG CATGA
 
Protein sequence
MRVADMVTSR YDGIRLQDVT DEFACDHRTA QRMMRAFEAV FPQVSVTEDD QRRRRWHLPR 
SDPRWLQAQG LRDSELAALE MAEKRALRDG ALEDAKNIRA SAIEKYADAL RRISFAWRSS
RFSRSKAFSF SAISVEILAR SPRSTSAFLT HLFSVWGAHP IFEEIDKIAP LGTLPCNALP
CSGPAALMLP GIVQNQANGT LAYVGGTLVR RLAHDASSCS GVEASGKPGA VQWQVTVSSQ
ASAVPRFASR WPVA