Gene Dshi_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4066 
Symbol 
ID5714595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand
Start bp125896 
End bp126294 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID641276978 
ProductMerR family transcriptional regulator 
Protein accessionYP_001542274 
Protein GI159046604 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCG GAGACGTTGC CCGACAATCG GGTGTGCCCC CAAAAACAAT CCGCTACTAC 
GAGGACATCG GGCTGATCCG CCCGAACCGT AGCGAGAACG GCTACCGCGC GTTCACCGAG
AGCCACATTC ACAAGCTGGC GTTTCTGGGT CGCGCACGGG CCTTGGGGTT CACCATCGAA
GATTGCAGGA CGCTCCTGTC GCTCTACGAG GATGAAAACC GCGAAAGCAT GCAAGTGAAG
GCGGTTGCGG AAGACCATCT GCGCCAGATC GAGGAAAAGA TCGCGAAACT GCAATCCATG
CGCGCGACGC TCGCCGAACT GGTGGAAAAA TGTGCCGGGG ATCACCGGCC CGACTGCCCC
ATCATCGAGG ATCTGTCGCC GGAGCGGTTG GCCAAGTGA
 
Protein sequence
MNIGDVARQS GVPPKTIRYY EDIGLIRPNR SENGYRAFTE SHIHKLAFLG RARALGFTIE 
DCRTLLSLYE DENRESMQVK AVAEDHLRQI EEKIAKLQSM RATLAELVEK CAGDHRPDCP
IIEDLSPERL AK