Gene Dshi_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4059 
Symbol 
ID5714588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009957 
Strand+ 
Start bp118813 
End bp119406 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID641276971 
Productputative cytochrome c-like protein 
Protein accessionYP_001542267 
Protein GI159046597 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CGACTATCGT AGCGGCAGTG TTGATTGCAG GTACTGCGGT CACGGCATTC 
GCGCATAGCG GTGCCACCGG CATCGTGAAA GAGCGCATGG ATGCCATGCT TGCAATGGGG 
AAGGCGGTCA AGACCGTGGC CCCGATGATG CGGGGCGAAA CGGCCTATGA CGCAGAAACA 
GTGCGCGATG CCGCGCGCCT GTTCCAGCAG CACGCCGGTG AGAGCATGAC AAAGCTGTTC 
CCAGAGGGCA CAGGGGGCAT GCCCTCGGAA GCCAAGGACG AGGTGTGGAC CGACTGGGAG 
CGCTTCGCGG CATTGGCAAG TCAGCTGGAA GAATACTCTG AGGGCCTGGA ACGCGCAGCC 
GACAATGGAT TGGGCGGCAT GAGCGGCAAT ACCTCCATGG ATGGCGCCTC GATGATGGGC 
GGCGGGTCAA TGATGGGAGG CGATACAACC ATGATGGGCG GGAGCACGAT GATGGGCCGA 
GGCGACATGA TGGATGCGGC CGCCATTGCC GAAATGCCCG CCGACGCAGC ATTCGCGATG 
ACGACCCAGG TCTGTTCCGC ATGCCATGAA CGCTTCCGGG CGGAAGAAGA CTGA
 
Protein sequence
MKKTTIVAAV LIAGTAVTAF AHSGATGIVK ERMDAMLAMG KAVKTVAPMM RGETAYDAET 
VRDAARLFQQ HAGESMTKLF PEGTGGMPSE AKDEVWTDWE RFAALASQLE EYSEGLERAA 
DNGLGGMSGN TSMDGASMMG GGSMMGGDTT MMGGSTMMGR GDMMDAAAIA EMPADAAFAM 
TTQVCSACHE RFRAEED