| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3989 |
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| Symbol | |
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| ID | 5714518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009957 |
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| Strand | - |
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| Start bp | 50603 |
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| End bp | 52936 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641276902 |
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| Product | relaxase/mobilization nuclease family protein |
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| Protein accession | YP_001542198 |
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| Protein GI | 159046528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGA ATGATGCTGT CGATGCCGTC ACGGGCGAGG TTTTCCGGGA CGGCTGGAGC
CGGATCCGGG GCTCGATGCA GGGGCTGCAT GTCGCCAAGC AGAGCCAGCT TGTGCGCGCG
GCGGCAGGGC ATCGGCCAGC GGTCTTCAAG GCGATTCGGG GCGGCGGTAC GCATACCAAA
TCACAGCTCA CAAACCAGCT CGAGTACCTC ACCACCAAGT CCACCCATAT CGTGGACAGC
AGCGGGTTCT TCGATGGCAA GGCGAAGCTC GAAGCGAAGG ACATCAAGGA CCTCACCGAG
CGTTTTGCCA AGCGGTGGGA TGCGGGCTTC AAGCCCAAGC TTGGACAGAC GACCCATATG
CTCATGTCGT TCCCCATCGG CACGCGCGGG GAGGATGTGC GCGACATCGC GACGGATGTG
GCCGAGCGGT TCTTCCAGAC CGACGCGGGG CATTTCGACT ACATCATCGC GGTGCATGAG
GACCGCGATC ACCCCCATGC GCATCTGGTG CTGAACCGCC GCTCACAAGA AGGCGAGTTC
TTCTTTCTGG GGCGCAACCA CCGCTTCAAC TATGACGACT TCCGCCTCGC CATGGTCGAG
GAGGCGGAAA AGTATGGCGT GCGCCTGGAG GCCACGCGCC GGGTGGATCG CGGGGTTGTG
CATTACCCCG CCCGCACCAG CGAGGTCTAT GCGGCGAAAC AGGAGGGGCG CGCACCCCGC
GAGCGCGAAC GCGTGGGGCA GGACCTGACC CGGACGCTGG CGGAGATCGC CAACACCAGG
ACCGTCTACC ATTCGCTTGC CGCAGAGGCC TCCCGGGAGG CCCGGGAAGA CATCGCCGCG
GCACTCTTCC GCGCGGGCGA GGTGCTGGCG CATGGCGGGC AGCTGGACCG AACAGGAGAT
GTTTATATGG CCGAGGATCA AAGCTTCGAG GATCTGAGAA GCCTCTATGC GGAGAAGCTC
GCGCGGGTGC AGGGCATGAT CGCCGAAAAG TCCGACGCCG AACGTCCCGT GCTGGAAAAA
CGCCTCATCG AAATCCAGAC GCAGGTCCAG CACATGCAGC CGCTCGGATT ACGTTCGAGC
ACACTGTCTG AGGTGCCGTC GGAGGGCGGG GTCTACTCAG AGGCGAACAT CGACACCAGT
CAGCTGGACC GTCTGGCCGA GACGGACTTG CGGTCGCGCA TAGACACCGC CCTGCGCGGA
ACCGGGATCA GCACATCGGA AGTGGTCGCC CGGATCGAAA CCGGCGCCTC GAATGCCGCG
CTTGAGCATC AATGGATCGC CGATGATCTC TCCAAGGTGG CCGAGGCGCG GGATCTGAAC
CTCGAACGCC GCGCCGACCT GGAAAAGGCG CGTGACATCC TGAATGACGT GCATGTCGAG
CTTGGCACGC TTCTGGAACG GGAGAACGTG CTGCGCCGGG ATGGGGTCGT GGAGGAGAAA
GCGGTCAGCG AGCGGTTCCA TTATCACCTG GACGCGGTCC GGGCGATGGA AGGGACAATC
CGTCAGGAGA TGCGCGCAGA CGGCCTGACC GCGCAGCAGA TCGAGGACCG GGACTGGGAG
GTTGCCTCAC GGGCGGAGCG CCGCATCGAG GCGGAGCAGC GCGCGTATCT CGAGGCCCAT
CCGGACCTGC TCGCCCGTCC GGACGATGTG ATCGACCGGT CTGAACCCTA CAGGGAGACC
ATCACCGATG TAGCCCGCGC CAAAGCGATC ACCCGCGAAG TCGACCGCAT CATGGAGGGA
CGCGACCTCC GTACGCCCGT TGCAGATGCC GTCACGGATG ACTTACGCGC GCGCTATCCG
GACATGCCGT CTCACCTCGC CCGTGGGCTC GGCGCGACCT ATGCGGCCGT CGTCGAGATC
CGGGACACGG AGGCCATCAA TCAGGTCCGC CGCGAAACCG AGATGCGTGA GGGGCTTGGG
GTTGGCACGC GTGACGCACC CCTCGCAGCC CGCAGTGAAA CTGCGCCGCA GTCTGACCGT
ACCGACCGTC TCGCAGGCGA GATTGTGCGT GTCCTGGACC AGCAGCGGGC AGGCGAGCTG
TCCGCGCCCT TCGAGACCGA AGGGGAGCGG TACGCCTTCC GCGAGGAGAT CGCGCGCGTG
CTGGATGACC GCCAATTGGG CCGCCTCACA TCCGGCGATG CCGATGCGCT GGACAAGGTT
CTCGAGGACC GTCTCGACCG GCTCTATGTC GCCAAGGTCT ACCTGCAATC CGATGCGGCG
ACGGCCAACA CCGAGGCCTT GCGCCAGGTG GTCGATGAAC TTGCCGACGC CGAGTATGAA
AAACACCGCG CGACAGACGT GGATGGCGAG ACCGAGCGGG GCCAGGTCCA TTGA
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| Protein sequence | MRLNDAVDAV TGEVFRDGWS RIRGSMQGLH VAKQSQLVRA AAGHRPAVFK AIRGGGTHTK
SQLTNQLEYL TTKSTHIVDS SGFFDGKAKL EAKDIKDLTE RFAKRWDAGF KPKLGQTTHM
LMSFPIGTRG EDVRDIATDV AERFFQTDAG HFDYIIAVHE DRDHPHAHLV LNRRSQEGEF
FFLGRNHRFN YDDFRLAMVE EAEKYGVRLE ATRRVDRGVV HYPARTSEVY AAKQEGRAPR
ERERVGQDLT RTLAEIANTR TVYHSLAAEA SREAREDIAA ALFRAGEVLA HGGQLDRTGD
VYMAEDQSFE DLRSLYAEKL ARVQGMIAEK SDAERPVLEK RLIEIQTQVQ HMQPLGLRSS
TLSEVPSEGG VYSEANIDTS QLDRLAETDL RSRIDTALRG TGISTSEVVA RIETGASNAA
LEHQWIADDL SKVAEARDLN LERRADLEKA RDILNDVHVE LGTLLERENV LRRDGVVEEK
AVSERFHYHL DAVRAMEGTI RQEMRADGLT AQQIEDRDWE VASRAERRIE AEQRAYLEAH
PDLLARPDDV IDRSEPYRET ITDVARAKAI TREVDRIMEG RDLRTPVADA VTDDLRARYP
DMPSHLARGL GATYAAVVEI RDTEAINQVR RETEMREGLG VGTRDAPLAA RSETAPQSDR
TDRLAGEIVR VLDQQRAGEL SAPFETEGER YAFREEIARV LDDRQLGRLT SGDADALDKV
LEDRLDRLYV AKVYLQSDAA TANTEALRQV VDELADAEYE KHRATDVDGE TERGQVH
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