Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3930 |
Symbol | |
ID | 5714459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | - |
Start bp | 152139 |
End bp | 152852 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641276843 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001542139 |
Protein GI | 159046468 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.709239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.547681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGG ATGATCTGAG AGTACACGAC GCGGCGCCGG ACCGCGCCGA AACCACCCAG AACCCGGTGT TCGAGGGGGT GGAGCGGGCG ATCCACGAAC AGCGCCTGCC CCCCGGCACG CGCCTGGCCG AGGCCGAGTT GACCGAGATC TACGGCGTCT CCCGCACCAT CGTGCGCGCC GGCCTGCAGG CGCTTTCCCA TGCGCATCTC GTCACGATCC GGCCCAATCG CGGCGCCCGC GTCGCCCAGC CGACGCCCGA AGACGCGCGC GAGGTGTTCG AGGCCCGCGA ACTGATCGAG CCGCGCACCG CCTACGAGGC CGCGCGCAAG GCCACCGTCG CCGACATTGC CCACCTGCGC AGGCACAGCG CCGAAGAACA GGAGGCGCTT GCCGCCCGGC AACATGGGCG CGCCCTGCGT CTCGGCGGCG CCTTCCACGT TGAAATCGCA CGAATATCCG GACAGAGAAC CCTCGAAGGG TTCGTCGAAG AACTGGTCGC CCGCTCCGCC CTGATCATCT CCCTCTACTG GGCGCGCGAA CGGGTCCGCT GCGACACCCA ATGCCATTCC AGGCTGATCG ACGCCATTTC CCGCCATGAT GCCGACGAAG CGGAAAGCCT GATGCGCTCC CACCTGCTCG ACATCCACAG CGCCCTCGAT TTCGGCGACG ACAGCGCCGA CGACACCGAT CTGCGCGGCA TGCTCCTCGG GTGA
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Protein sequence | MDMDDLRVHD AAPDRAETTQ NPVFEGVERA IHEQRLPPGT RLAEAELTEI YGVSRTIVRA GLQALSHAHL VTIRPNRGAR VAQPTPEDAR EVFEARELIE PRTAYEAARK ATVADIAHLR RHSAEEQEAL AARQHGRALR LGGAFHVEIA RISGQRTLEG FVEELVARSA LIISLYWARE RVRCDTQCHS RLIDAISRHD ADEAESLMRS HLLDIHSALD FGDDSADDTD LRGMLLG
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