Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3928 |
Symbol | |
ID | 5714457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | + |
Start bp | 150931 |
End bp | 151857 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641276841 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_001542137 |
Protein GI | 159046466 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.45742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATTA CCCTTCTGGA TGGCGGTCTC GGGCAGGAGC TCGTGCGGCG CGCCGGGCGT GCGACGCCGC TGTGGTCGAT GGAGGCATTG CTGAACGCGC CGGACCTGGT GCGCGCGGTG CATGACGACT TCTTCGCCGC GGGCGCGGAG GTGGCGACGA CCAACACCTA TGCGGTGCTG CCGGATCGGC TGGCGGCGTT CGACATGGCG GACCAGCTCG CCCCCCTGAC CGAGCGGGCC TGCGGGATCG CCGCGGCGGC GCGGGATGCG GCGGGCGGCG GGCTGGTGGC GGGGGCGCTG GGGCCGCTGG GCTTTTCCTA TCAGCCGGAC AAGGCGCCGC CGCCGGAGCA GGCGGCGGAG ATCTATGCCG AGGTGGCGCG GCTGCAGGCG CGGATCGTCG ATGTGCTGGT ACTGGAGACC ATGTCGTCGG TCGACCAGGC GCGCGGCGGC ATGATGGGCG CACAGGTGGC GGGAAAGCCG GTCTGGCTGG CCCTGAGCGT GGACGACGCG GATGGCACGA AGCTGCGCTC CGGCGAGCCG CTGGCGGCGA TTTCCCCTGT GTTAGAGACG TTTTCGCCCG ACCGGGTGCT GATCAATTGC GCCCGGCCCG AGGCGGTGTC GCAGGCGATG CCGATCCTGG CGGGGCTACA TCCGCGGATC GGGGGCTATG CCAACGGGTT CACGCGGATC GAAAGCGGGT TCAACCGGAT CGGGGCCACG GTGGATTTGC TGCAGGCGCG GCAGGATATC GGGCCCGCCG CCTATGCGGC CTTCGCGCAG GCCTGGGTGG CGGCGGGGGC GACCACGGTC GGCGGGTGCT GCGAGATCGG GCCTGCCCAT ATCGAAGAGC TGGCGCGGGT GCTGAAAACC CCTGTGAAAG AGACGATTCC GGCTGGCCTG TCGGCGCGGG AAGTTGCTCC AGATTAA
|
Protein sequence | MDITLLDGGL GQELVRRAGR ATPLWSMEAL LNAPDLVRAV HDDFFAAGAE VATTNTYAVL PDRLAAFDMA DQLAPLTERA CGIAAAARDA AGGGLVAGAL GPLGFSYQPD KAPPPEQAAE IYAEVARLQA RIVDVLVLET MSSVDQARGG MMGAQVAGKP VWLALSVDDA DGTKLRSGEP LAAISPVLET FSPDRVLINC ARPEAVSQAM PILAGLHPRI GGYANGFTRI ESGFNRIGAT VDLLQARQDI GPAAYAAFAQ AWVAAGATTV GGCCEIGPAH IEELARVLKT PVKETIPAGL SAREVAPD
|
| |