| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3892 |
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| Symbol | |
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| ID | 5714421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 116359 |
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| End bp | 117396 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276805 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_001542101 |
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| Protein GI | 159046430 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.740774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.178097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAG ATCTCGACAT TCTTGGCGGG CGCAGTGTGC GGGACATCGT GGGCGAGGCC
CCGGATCTCG ACACGTCAGC CGAAGATGCT GCGCTCGAAA GCTTGGGGGA TCGCAGCGCC
CTCGACATCT GGAATTCGCA ATCCGCGCTG GAACCAAGCG GGCTGGGTGC CGCCGCCGCC
TATGACCTGA CAATCGGCAT GGTCGTGGGC CTCGGGGCGG TGTTCGTGGT CGTGATGGCG
ATCGCCTGGT TCGCATGGCA CAGCAAACGC CCAGCAGGCC ATTGGTGGGT GTGGACCGGC
GGCGTGATCA CGCCGCTCAT AGCAATCTCG ACCGTGATGG TGGCGTCGAC CGCTGCCCTT
GTGGCGACGA CGCGGCCCGC ACCCGACGCA CTGGTGATCG AGGTGACCGG CTATCAGTTC
TGGTGGGATG TGGTCTACGA TCCGGACGGG ACACCGTTGC GGGACGCCAA TGAATTGATC
CTGCCCGAGG GTCGCCCGGT CACCCTGCGT CTGAACTCCA ACGATGTGAT CCATTCCTTC
TGGGTGCCCT CGATTTCGGG CAAGATGGAC ATGATCCCCG GACGCACCAA CACTCTGACG
ATAACCGCGA CCGAAACCGG CCAGTTCCGC GGCCAATGCG CCGAGTTCTG CGGGTTGTCC
CACCCGAAAA TGGCATTCGA GGTAACGGTC CTGCCCCCCG AGGCCTTCGA CAAGTGGCTT
GCCACCACGC GCGGCGCGGC GCGCGACGTG GCCCGACCCG CGCAAGCCGA GGGACGCGAG
GTTTTCCTGA GCGCCGGCTG TGCCGCCTGT CACGAAATCC GCGGGGTCGC AGAAGGTGGG
CGGCTGGGCC CCGACCTGAC CCGTCTGGGC GCGCGCGCCA GCCTCGGCGC GGGCATGTGG
CGCATGAACC AGGGCAACGT CGCAGGCTGG ATCGCCGATG TGCAGGACAT GAAGCCCGGC
GCGCAAATGC CCTCCTACAA CCACCTCAGC GGTCCGGATC TGCGCAACCT GTCCGCTTAC
CTCGTGAGCC TGCAATGA
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| Protein sequence | MDEDLDILGG RSVRDIVGEA PDLDTSAEDA ALESLGDRSA LDIWNSQSAL EPSGLGAAAA
YDLTIGMVVG LGAVFVVVMA IAWFAWHSKR PAGHWWVWTG GVITPLIAIS TVMVASTAAL
VATTRPAPDA LVIEVTGYQF WWDVVYDPDG TPLRDANELI LPEGRPVTLR LNSNDVIHSF
WVPSISGKMD MIPGRTNTLT ITATETGQFR GQCAEFCGLS HPKMAFEVTV LPPEAFDKWL
ATTRGAARDV ARPAQAEGRE VFLSAGCAAC HEIRGVAEGG RLGPDLTRLG ARASLGAGMW
RMNQGNVAGW IADVQDMKPG AQMPSYNHLS GPDLRNLSAY LVSLQ
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