Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3879 |
Symbol | |
ID | 5714408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | + |
Start bp | 102305 |
End bp | 103117 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276792 |
Product | hypothetical protein |
Protein accession | YP_001542088 |
Protein GI | 159046417 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.394036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCATTG ACTACAATGA CTTGCAAAGC AAAGGGGTTG ATATAGCCGC CGCTATCAAT GAAACTTTCC TTAATAAATT TGCCACTAGT CACCACACTG CTAATCCAAG CCTATATTCT GGCAAGCAAA GGTTCACTCA GTTTGACAAC GATATCGAGA TTGCCTTCAA GGCGAACACG CCCCTAACTT TTGATTTTTC CAGACAAGTA TCGCGCGCCC GCTTCAAGCG CCTTTGGCTC CAACACCTTA AAATTAAGGG CGTTCCTGAG AGTACGAAGC TCGATGAAGT GTTGACAACT CCACCTAATG TCTCTCTTGG ATGCGAGAGT GTTATTTTTG AGGTTAAGAT ATTTGATGGC AAGAGTAATG ATGTTCTACT AACCGTTGAT TTTGATTGGA GCCTACTTAC TCTGGCCGCC ATCAGCCTAG ATGACGGCAA ACTCTCAATG GAACCAGTTC GAATAGGCTT CTCGCAAAGA ATGGCGATCA TTGAAGAAGC AATTGCCGCT AGAGTTTCGT CCAAATTATC AACGTTAGGA GTTCAACAGA AGCCTGAGCG ACCCGCTACG TTTGGCGACC CATCCGACCC CGTCTGGTGC GCTAAACTGG AAAAAATGAT TATCCTATTG CTCAACCAGG TTCTGGCTGT ACAGATCGCA AATTTTATTG CTGAGTTTGA GTTGCCTCGA GCGATTGAGG TAGCCGATGG CATCGCAATA GATGCCAGGT TATTTGGCGA TACACAACGA CAATCTAGTG GTCGGCGCTC GCATTACCGC GCAACCGACT GGCATGGCAG CTCTATAGTC TGA
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Protein sequence | MSIDYNDLQS KGVDIAAAIN ETFLNKFATS HHTANPSLYS GKQRFTQFDN DIEIAFKANT PLTFDFSRQV SRARFKRLWL QHLKIKGVPE STKLDEVLTT PPNVSLGCES VIFEVKIFDG KSNDVLLTVD FDWSLLTLAA ISLDDGKLSM EPVRIGFSQR MAIIEEAIAA RVSSKLSTLG VQQKPERPAT FGDPSDPVWC AKLEKMIILL LNQVLAVQIA NFIAEFELPR AIEVADGIAI DARLFGDTQR QSSGRRSHYR ATDWHGSSIV
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