| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3824 |
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| Symbol | |
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| ID | 5714353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 30459 |
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| End bp | 31769 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276739 |
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| Product | phenylacetate-CoA ligase |
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| Protein accession | YP_001542035 |
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| Protein GI | 159046364 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1541] Coenzyme F390 synthetase |
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| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0827131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.36821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC TGAGCCCGAA CCGGGCGGAG CTGGACCCGA TCGAGATCGC CAGCCGCGAC
GAGATTGCGG CGCTCCAGCT CGACCGGATG AAATGGTCCC TGCGCCATGC CTATGACAAT
GTGCCGATGT ATCGCGCCCG GTTCGACGCG GCCGGGGTGC ATCCCGACGA CCTGCGCGAC
TTGAAGGATC TCGCGAAGTT TCCCTTCACC CACAAGAGCG ACCTGCGCGA CCACTATCCT
TTCGGCATGT CGGCGGTGCC GCGCGACAGG CTGGTGCGGG TGCATGCCTC GTCGGGGACC
ACGGGCAAGC CGACGGTGGT GGTCTATACC CGCCACGATA TCGAGGTCTG GGCCGACACC
CTGGCGCGCA GTCTGCGGGC CTCCGGCCTC AGGGCGGGCG ACATGATCCA CAATGCCTAT
GGCTACGGGC TGTTCACCGG GGGTCTGGGC GCCCATTACG GCATCGAGAA GCTGGGCGCG
ACGGTCATTC CCATGGGCGG CGGGCAGACC GAAAAGCAGG TCAGCCTGAT CCATGATTTC
CGGCCGACCG CCATCATGGT GACGCCGTCC TACATGCTCA ATATCCTTGA AGGGTTCCAC
AAGGCGGGTC TGGATCCGCG GCAATCCTCG TTGCAGGTGG GCGTGTTCGG GGCCGAGCCC
TGGACCAACG CCATGCGCCA GGAGGTCGAA GAGGCCTTCG ACATGCACGC GGTGGACATC
TACGGGCTGA GCGAGGTCAT GGGGCCGGGG GTGGCCAATG AATGCGTGGA GACCAAGGAC
GGGCTCCATG TCTGGGAAGA CCATTACTAT CCGGAGATCA TCGACCCGCA GACCGGCGAG
GTGCTCAAGG ACGGTGCGGA GGGCGAGCTG GTCTTCACCA CCCTGACCAA GGAGGGGATG
CCGATGATCC GCTACCGCAC GCGCGATCTG ACCCGGCTTC TGCCCGGCAC GGCGCGCAGC
ATGCGGCGGA TCGAAAAGAT CACCGGGCGC TCCGACGACA TGATGATCCT GCGCGGGGTC
AATGTCTTTC CGACCCAGAT CGAGGAACAG GTGATGGCCA CCGGCGGGCT GGGCCCGTAT
TTCCAGATCG AACTCTACAC CTCGGGGCGG CTGGACGCGA TGCGGGTCTT CGTCGAGGCG
ACCCCGGCGG CGGCGGACGA GCTGTCGAGA ACCGCCGCGG CCCGTGTCCT GACCAAGCAT
GTCCGGGACA TGGTCGGGGT GTCCATCGAA GTGGTCGTCG GCGACCCCGG CTCGGTCGCG
CGCAGCCAGG GCAAGGCCGT CCGCGTCATC GACAACCGCA AAAAGGACTA G
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| Protein sequence | MKDLSPNRAE LDPIEIASRD EIAALQLDRM KWSLRHAYDN VPMYRARFDA AGVHPDDLRD
LKDLAKFPFT HKSDLRDHYP FGMSAVPRDR LVRVHASSGT TGKPTVVVYT RHDIEVWADT
LARSLRASGL RAGDMIHNAY GYGLFTGGLG AHYGIEKLGA TVIPMGGGQT EKQVSLIHDF
RPTAIMVTPS YMLNILEGFH KAGLDPRQSS LQVGVFGAEP WTNAMRQEVE EAFDMHAVDI
YGLSEVMGPG VANECVETKD GLHVWEDHYY PEIIDPQTGE VLKDGAEGEL VFTTLTKEGM
PMIRYRTRDL TRLLPGTARS MRRIEKITGR SDDMMILRGV NVFPTQIEEQ VMATGGLGPY
FQIELYTSGR LDAMRVFVEA TPAAADELSR TAAARVLTKH VRDMVGVSIE VVVGDPGSVA
RSQGKAVRVI DNRKKD
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