Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3802 |
Symbol | |
ID | 5714331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | + |
Start bp | 10649 |
End bp | 11578 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641276717 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001542013 |
Protein GI | 159046342 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.238076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.337014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGGAC TGACCCTCAA ACACCTGCGC TATTTCGATG CCCTGGCCCG CACCGGCCAT TTCGGCCGCG CGGCGGAGGC CTCGGGCATC TCGCAACCGG CCCTGTCCAT GCAGATCAAG GAGTTGGAGG CGATGCTGGG GGCGCCGCTG GTCGAACGGC GCGCGCGCGA GATCCGGCTG ACCGGGCTGG GGGAGGACCT GCGCCTGCGG GCGCGCAAGA TCCTGGCCGA GATCGGGGAG CTGGACGAGC TTGTGCGGTC CCGCGACGGG CCGCTGGTCG GGCGGCTGCG GATCGGGGTG ATTCCCACCG TCGCCCCCTA TTTCCTGCCC CAGGTGATCC GGGCGCTGGC CCTTCGGATG CCCGCGATCG AGTTGCAGCC GCGCGAGACG GTGACCGAGA CGCTGATTGC GGAGCTGCTC GATTCGCGGC TGGACGCGGC GCTGGTGGCC CTGCCGATCT CGGAGCCGGA CTTGCGGGAA TTCGCGCTCT TTTCCGAGGA TTTCGTGCTG GTGCGCGCCG CCGACGAGGC GGACCAGCCG GTCCCCAGCC CCGAGCGGCT GAAGGAGATG CGGCTCCTGC TGCTGGAGGA AGGGCATTGT TTCCGCGACC AGGCCCTGAG TTTCTGCGAT ATCTCCGTGG GCGAGCCGCG CTACATGATG GAGGGCAGCT CGCTCTCGAC CCTGGTGCAG ATGGTTGGCG CGGGCATGGG GCTGACCCTG ATCCCGGAGA TGGCGGTGCC GCTGGACACC GCCCGCGCCG AGGTGTCGGT CGCCCGTTTC GAGCCGCCCG CGCCGTCGCG CACCATCGGC ATGGTCTGGC GCAAGACCAA CCCCCTGGCC GCGCAACTGG CCGAGATCGG CGCGACCCTG CGCCAGGCCG GGGCGGTGGC CGATGCGGGG TTTTCCGCGC CGCGTGGTCC GATCGGATGA
|
Protein sequence | MKGLTLKHLR YFDALARTGH FGRAAEASGI SQPALSMQIK ELEAMLGAPL VERRAREIRL TGLGEDLRLR ARKILAEIGE LDELVRSRDG PLVGRLRIGV IPTVAPYFLP QVIRALALRM PAIELQPRET VTETLIAELL DSRLDAALVA LPISEPDLRE FALFSEDFVL VRAADEADQP VPSPERLKEM RLLLLEEGHC FRDQALSFCD ISVGEPRYMM EGSSLSTLVQ MVGAGMGLTL IPEMAVPLDT ARAEVSVARF EPPAPSRTIG MVWRKTNPLA AQLAEIGATL RQAGAVADAG FSAPRGPIG
|
| |