Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3797 |
Symbol | |
ID | 5714326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | + |
Start bp | 5736 |
End bp | 6419 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641276712 |
Product | Asp/Glu racemase |
Protein accession | YP_001542008 |
Protein GI | 159046337 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.175328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.366976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC GTCTTGCCAT ACTGAACCCG AACGCGACCC GGACCATGAC CGACGACATG GTCACCGCCG CGCGCGCCGC CGTCCCGACC GATGTGGAGG TCGTGGGCTA CACCAACCTG GCCGGGCCGC CGGCGATCCA GGGGGCGGAG GATGCGCTCG CCTGCCTGCC GGGTCTTTTC GCGCTGTATG ACACGGCCCT GGCCGAAGGG GCCACGGGGG TCGTGGTGGG CTGTTTCGAC GATACCGGGT TGGCGGAGTT GCGGGCGCGC TGCGCCGGGC CGATCGCCGG GCTGGGGGAG GCGGGCTGCC TCGCGGCAAG CCTGCACCGG GCGGAATTCG CGGTGCTGAC CACGACCGAG GGCTCGGTGC CGGTGATCGC GGACAATATC GACCTGATGG GTCTGGCGCC GCGCTGCCGG GGCGTCGTGG CCGCGGGCGT GCCGGTTCTG GGCCTCGCCG CCGGTCTGCC GCAGTTGCGC GCCACGCTCG CCGGGCTGCT GGAGACCGCG CCGGAGGCGG CGGTCGTGCT GGGCTGCGCA GGGATGTCGC CCCTGGCCGG GCAGATCGCC GAGGGCGTGG ACGTGCCAAT CATCGACCCG GTTCTGGCGG CCACGGCGCT GGTCCTGTCG GCGGCCCGGG CCGCGCAGCG CGACCCGGCG ACGAGCCTGG AGCGGAGCGC CTAG
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Protein sequence | MKMRLAILNP NATRTMTDDM VTAARAAVPT DVEVVGYTNL AGPPAIQGAE DALACLPGLF ALYDTALAEG ATGVVVGCFD DTGLAELRAR CAGPIAGLGE AGCLAASLHR AEFAVLTTTE GSVPVIADNI DLMGLAPRCR GVVAAGVPVL GLAAGLPQLR ATLAGLLETA PEAAVVLGCA GMSPLAGQIA EGVDVPIIDP VLAATALVLS AARAAQRDPA TSLERSA
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