| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3796 |
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| Symbol | |
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| ID | 5714325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 4738 |
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| End bp | 5739 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641276711 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001542007 |
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| Protein GI | 159046336 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.418309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC CCCTGGTAGA GATGACCGAC GTGACGGTGC GCTTCGACGG CACGCCGCCG
GTCCACGCGG TCAATGGCGT GTCCTTCAAG CTGGCCCCGG GCGAGGTGCT GGGCATTCTC
GGCGAGAGCG GGTCGGGCAA GTCGGTGACG CTGAAGACGC TCTTGCGGCT CCTGCCCGAG
AAAAAGACCC GCATCGGCGG GCAGGTGCGC GTCGACGGGC AGGACGTTCT GGCTCTGAAC
GGGCGGGCGC TGGCCGATCA CCGGGGCGGG GTCGTGTCGA TGATCTTCCA GGACCCGGCG
CTGGCGCTGG ACCCGGTCTA TACCATCGGC CAGCAGATCG CGGAATCGGT GGTGCGCCAC
GAGGGGCTGA GCCAGCGCGA CGCCATGGCG CGCGCGCTGG AGATGCTGGA GCTGGTGCGC
ATCCCCTCGG CCAAGCGGCG GCTGAAGGCC TATCCGCACG AGATGTCGGG CGGCATGCGC
CAGCGGGCGA TGATCGCGCT GGCGCTGGCC TGCAAGCCGA AGCTGCTGCT GGCGGACGAG
CCGACCACCG CACTGGACGC CACGGTGCAG ATCCAGGTGC TGCTCCTGCT GCGGGAATTG
CAGAAGGAGA TGGGCATGGG CGTGATCTTC GTCACCCATG ATATCGGGGT GGCGGTGGAG
GTCTCGGACC GGCTTGCCGT GATGTATGCC GGCAGTTTCG TGGAGACCGG CAGCGTCGCC
GAGATCATCC GCGACGGGCG CCATCCCTAT ACGAAGGGCC TGCTTGCGGC GAACCTGGTG
GGCGCGGAGC CCGGCACGCC GCTGGAGGCG ATCCCCGGCG CGCCGCCCGC GCTCCATGCT
CCGCCGGTGG GCTGTGCCTT CGCGCCGCGC TGCGACCGCG CGCGGGAGGC CTGCGCAAGC
GATCCGCTGC CGGTGTGGAC GCAGGGGCCC GACCGCTGGG CGCGCTGCGT CGCCGCGGTG
GAGGACGCCC GGCCCTCCGG TCAGGTGTCG GCGGCGAAAT GA
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| Protein sequence | MTHPLVEMTD VTVRFDGTPP VHAVNGVSFK LAPGEVLGIL GESGSGKSVT LKTLLRLLPE
KKTRIGGQVR VDGQDVLALN GRALADHRGG VVSMIFQDPA LALDPVYTIG QQIAESVVRH
EGLSQRDAMA RALEMLELVR IPSAKRRLKA YPHEMSGGMR QRAMIALALA CKPKLLLADE
PTTALDATVQ IQVLLLLREL QKEMGMGVIF VTHDIGVAVE VSDRLAVMYA GSFVETGSVA
EIIRDGRHPY TKGLLAANLV GAEPGTPLEA IPGAPPALHA PPVGCAFAPR CDRAREACAS
DPLPVWTQGP DRWARCVAAV EDARPSGQVS AAK
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