| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3759 |
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| Symbol | |
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| ID | 5714288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 162514 |
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| End bp | 163542 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641276674 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001541970 |
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| Protein GI | 159046298 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.076485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.271017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGT TTGTCGGATT GGATGTGTCG CTTGCGAAGA CTTCGGTCTG CGTGATCAGC
GAGTACGGCA AGATTATCAA AGAGGCAGAG ACTGAAAGCG AACCCGAGGT TCTGGCGCGC
TGGCTGCATG ATCTGGACGG CAGCATCGCG GCGATTGGCC TGGAGGCTGG GCCTCTGTCG
CAATGGCTGC ACCGAGGGCT GACCGAAGCT GGCCTTGATA CGGTGCTCAT GGAAACGCGC
CAAGTGAAAG GAGCGCTGAA GGCGATGCCG ATCAAGACGG ATCGGCGCGA TGCAGAAGGG
ATTGCACGCC TTCTTCATCT CGGCTGGTTC CGCCCGGTCC ACTGTAAATC CGTGTCTGCT
CAGGAAACCC GGGCGGTTCT TGGCGCTCGA AAGGCTATCC AGCAGAACAT GATCGCTCTG
GAAATGTCGT TGCGCGGACT CCTGCGGAAC TTTGGCCTCA AGGTCGGCGC GATCTCCCGT
GGCAGGTTTG AGACACGCAT TCGGGAGTTG GCAGATGGCA ACCCGATGCT GGAAACCGCG
ACAGACCCGA TGCTGCGGGC CCGGGCGACC CTACGGCAGG AACTGGCCGG GCTCGAAGAA
CGCGTGCGCC AGTTGGCCTG GGATGATCAG GTTTGCCAAC GGCTTATGTC GATGCCTGGA
ATCGGTGCGG TCGTAGCACT TACATTCCGT GCTGCGGTCG ATGATCCTGC CCGCTTTCGG
TCTTCAAAGA GAATTGGCCC CTGGGTTGGC CTGACGCCCT CACGCAACCA GTCCGGTGAA
CGAGACGTGT CAGGCGGCAT CACCAAGGCT GGTGACGTCA ATCTGAGGCG AACATTGTGC
CAGGCAGCAA CCGTCATGAT GAATCGCGGC CGATCGACAT GGCTGAGAAC ATGGGGAGCC
CAGCTCGCGC AGCGGCGTGG TCGCAAAATC GCGATGGTCG CCCTCGCACG CCGCATCGCT
GTCATCCTCC ATCGGATTTG GGTCGATGGC ACAACCTTCC AGCCAGATGC CGCGCCGAAC
CTTGCCTGA
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| Protein sequence | MKLFVGLDVS LAKTSVCVIS EYGKIIKEAE TESEPEVLAR WLHDLDGSIA AIGLEAGPLS
QWLHRGLTEA GLDTVLMETR QVKGALKAMP IKTDRRDAEG IARLLHLGWF RPVHCKSVSA
QETRAVLGAR KAIQQNMIAL EMSLRGLLRN FGLKVGAISR GRFETRIREL ADGNPMLETA
TDPMLRARAT LRQELAGLEE RVRQLAWDDQ VCQRLMSMPG IGAVVALTFR AAVDDPARFR
SSKRIGPWVG LTPSRNQSGE RDVSGGITKA GDVNLRRTLC QAATVMMNRG RSTWLRTWGA
QLAQRRGRKI AMVALARRIA VILHRIWVDG TTFQPDAAPN LA
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