Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3757 |
Symbol | |
ID | 5714286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 161654 |
End bp | 162001 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641276672 |
Product | IS5 family transposase OrfA |
Protein accession | YP_001541968 |
Protein GI | 159046296 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0560376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.26823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC TTTTTTGGCT CACGGACGCG CAGATGGCGC GTCTTGCCCC CTTCTTTCCA AAGTCCCATG GCAAGCCGCG CGTAGATGAT CGACGCGTTC TCAGTGGGAT TATCTTCATC AATCGCAATG GCTTACGCTG GCGTGACGCA CCCGTTGCCT ATGGCCCACA CAAGACGCTT TACAACCGTT GGAAACGGTG GAGCGATAAG GGGATCTTCG CGCGGATGAT GGCCGGTCTT GCCGCCGAGC ACGGCGAGAG GAAGACTGTG ATGATCGACG CAACTTACTT GAAGGCACAT CGCACGGCGA CCAGTTTGGG CGTCAAAAAG GGGGGCGTGG ACGCCTGA
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Protein sequence | MSDLFWLTDA QMARLAPFFP KSHGKPRVDD RRVLSGIIFI NRNGLRWRDA PVAYGPHKTL YNRWKRWSDK GIFARMMAGL AAEHGERKTV MIDATYLKAH RTATSLGVKK GGVDA
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