Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3748 |
Symbol | |
ID | 5714277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 155050 |
End bp | 155931 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641276663 |
Product | resolvase domain-containing protein |
Protein accession | YP_001541959 |
Protein GI | 159046287 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.57685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.861996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGA TAGGCTATGC GCGAGTATCG ACCGAGGATC AGACCCCCCT GCCCCAGTCG CAGGCGCTGA AATCAGCGGG CTGTGTCGAA ATCCATGAGG AACAGGCTTC TGGCGGTGAT CGTGCGCGGC CTGTGCTGGC GCGGGTGCTG GAACGGATCG GCAAGGGCGA TACGCTGGTG GTGGTGCGCA TCGACCGGCT GGCGCGGTCG CTGTCGCATT TGCTGGAGGT GATCGAACGG CTGGAAGCAA AGGGCGCCTT CTTCCGCTCG ATTCAGGACC CGATCGACAC CGGATCCCCG CAGGGCAAGT TCACGCTGCA GGTTCTGGGT GCAGCAGCCG AGTTCGAGCG CGCCCTGATC CGTGAACGGA CCAAGGCTGG GCTTGCCAGC GCACGAACAA AGGGGCGGGT CGGCGGAAAC CCTGGCCTGC GCGCCCGGGA TCCGGCTGCG CTACGCAAGG TCCGACTGGC GCGACAGGAC GGATATATGG AACGCCTGAA TGAAACTGCG CAGGACTGGG TGCCCCATGT GCGTCGGCTG CGCCCCGATC TGGCTTGGGA AGATGTGGTG CGCATCATCA ACGGCCCCCT ACCCGAGGCC CGGCGCTGGA CGCAAAGCCG TCTGCTGCGC GCTGTGAACG CCTACGTCCG CGATGGGTTC CTCCCCGCGA CCGTGCTTGA TCGCGCGGGC CCGCGTGCGC GAGATGATCG CCTGCCCGCC ATCGTCGCGG GTATCAAGGG CGCCGATCCC GACATTACGC TTCAGGCCAT CTGCGCCCGC TTGGAGAACA TGCGTGAGCG CACACCCCGC GGCCGGACAA GCTGGCAGCC ATCATCAGTG AAGATGTTGC TGGAGCGGGC GAAGCGGCTT GGGATACTAT GA
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Protein sequence | MPLIGYARVS TEDQTPLPQS QALKSAGCVE IHEEQASGGD RARPVLARVL ERIGKGDTLV VVRIDRLARS LSHLLEVIER LEAKGAFFRS IQDPIDTGSP QGKFTLQVLG AAAEFERALI RERTKAGLAS ARTKGRVGGN PGLRARDPAA LRKVRLARQD GYMERLNETA QDWVPHVRRL RPDLAWEDVV RIINGPLPEA RRWTQSRLLR AVNAYVRDGF LPATVLDRAG PRARDDRLPA IVAGIKGADP DITLQAICAR LENMRERTPR GRTSWQPSSV KMLLERAKRL GIL
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