| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3719 |
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| Symbol | |
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| ID | 5714248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 124654 |
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| End bp | 127605 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276635 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_001541931 |
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| Protein GI | 159046259 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG3427] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGG ATGGGCTGCA TCAGACGATG TTGCGGGTGG AAGACGCCCC GCTTCTGACC
GGGCGCGGCC AGTTCTTTGA CGATCTGCCG ACGCCGCACG GAACCTTGCA GGCCGCGATC
CTGCGCAGCC CCTATGCCCA CGCAAGGATC ACCGACATTT CGGCCGATGC CGCCCGCAGG
CTGGCAGGCG TTCACGCCGT CCTGACAGGC GAGGATTACG CAAGCGTCGC ATCGCCGCTG
ATGGTCGGGG TCAAGCTGCC CATCGAATGC TGGCCGATCG CACGCGACAA GGTGCGTTAT
GTAGGCGAGC CGGTCGCGGT GGTTCTGGCC GATGATCGCT ACCTCGCCGA GGACGCGCTC
GATCTCATCG AAGTCAGCTA TGATACGCTC GCCCCCGTCA TTGACCCGCT AAAGGCCCTC
GCGGACGACG CGCCTGTGCT GCACGACGAG ATGGGCGGCA ATCTTGGCGC CGATCGCCGT
TTTTCTTATG GCGACCCTGA CTCCGCCTTT GCCGAGGCCG ACCATGTCGT CGAGATTTCG
GTGCGCTATC CACGCAATTC CTGTACGCCC ATCGAAACCT ACGGCGTGCT GACCCGCTGG
AATCCGCACA CGCGGTCCTA TGACGTCACC TCGAATTTTC AGGGGCCGTT CTCGATCCAT
CCGGTGGTCG CGCGGGCGCT GAACGTGCCT GGCAACCGTC TGCGCCTGCG CACGCCCGAG
GATTCCGGCG GCAGCTTCGG TATCAAGCAG GGCGTGTTTC CCTATATCGC GCTTCTGTCC
GCCTGTGCGC GGCTGGCCGA CCGTCCCGTC AAGTGGGTCG AGGACCGGCT CGAGCATCTG
ACCGCCTCGG TGTCTGCCAC AAATCGCGCC ATCACGCTGC GCGCAGCGGT TACGGCAAAG
GGACGCGTGA CCGCGCTCGA CTACGATCAG GTCGAGGATG TCGGCGCCTA TCTGCGGGCG
CCGGAGCCGG CGACGCTCTA CCGCATGCAC GGCAACCTCT GCGGTGCCTA TGACATCGCC
AACCTGCGGG TGCGCAACCG CATCGTGATG ACGAACAAGA CGCCGACGGG GCTGAACCGC
GGGTTCGGCG GCCCGCAGAT CTATTTCGCG CTGGAACGGC TGATGCAACG TATCGCCATC
GAGCTGGGTC TCGATCCGGT GAATGTTGCC CGCGACAACC TGATCCCCAA GGGTGCCTTT
CCCTACCGCA CCGCCAGCGG TGCCACCTAC GATTCGGGCG ATTATCAAAA TGCCTTCGAC
ACGGCGTTGA AGGACGGCCG CTATGACGCG CTGTGCCAAA AGCGCGACGC GGCCCGTGCC
GAGGGTCGGC TTTACGGCAT CGGCCTTGCC GTGGCGGTGG AGCCGTCGGT ATCGAACATG
GGATACCTTT CGACCGCTCT GACACCTGCG GAACGGGCCA AGGCGGGGCC GAAAAACGGC
GCGCAATCCT GCGCGACCAT CGCCATCGAC CCGGTCGGCA GCATCACGGT GCAGATCGAT
TCCGTGCCCC AGGGCCAGGG CCACAAGACC GTCGCCGCCA GCATCGTCGC CGAACGGTTC
GGGCTGGAGC CGGGCGCGAT CACGGTCGTG GCCGCGATGG ACACCGGCAA GGACGCCTGG
TCCATTGCCG CCGGGAACTA TTCCAGCCGC TTTGCCGCCG CCTCCGCCGG GGCGGTGCGC
ATCGCCGCCG ACCGCCTGCG CGAGCGGATC GCCGCAATTG CCGCAAGCCA ACTCAACGCG
CGGCCCGAGG ATATCGAATT CGAGAATGGC AAGGTTTTCA TCGCGTCCAA CCCCGGGGCC
GCGCTCGTCT TCGCCCGTGT CGCCTCCACC GGGCATTGGG CTCCCGGCAC CCTGCCTGAC
GGAATTGCCG CGCCGATGCG CGAGACCGCG ATCTGGACCG CCCCCGAACT GACCGCCCCG
ACCGATGAGG ACGGGATCAA CTCATCGCTG TGCCACGCGT TCATCTTCGA TTTCTGCGGG
GTGGAGATCG ATCCCGTGAC CCATGAAGCC CGCGTCGACC ACTACGTCAC GATGCACGAC
TGTGGCACCA TCCTGCACGA AGGCATGGTC GAGGGGCAGA TCCGCGGTGC GTTCGCGCAG
GCGGTCGGTG CGGCGCTTTA CGAGGAATAC GTCTATGACG ACGACGGCGC GTTCCTTGCG
GGCACCCTGG CCGATTACCC GGTGCCCACG GTGCATGAAA TCCCTGACCT TGAGATATTG
CATACCTGCA CACCTTCGCC GCTGACCCCG CTGGGGGCCA AGGGCGTGGG CGAGGGCAAT
TGCATGTCCA CGCCGGTTTG CATTGCCAAT GCCGTCGCCG ATGCACTGGC ACCGGCTCGC
GGCAATGTCG ATGTCACCCT GCCGCTTTCG CCTGCGCGTA TCGCATCGTA TCTGCCGGAC
GAACCCACAG CACCCGAAGG CATCGCGCAG CCACGGCCCA GCTCCGGCAA GGGGCTGTCC
GGTCAGGGCG AGGCGCGCGT CGGTGCCGCA CCGCAGGAGA TATGGGATCT GCTGATGGAC
GCAGACCAAC TCGCCGCGAT CATCCCCGGC GCACATGGCG TCAAGCGCCT GTCGCCAACC
CGCTTTCTGG CCGATGTCAC GCTGGGCGTC GGGCCGGTCA AGGGGCGTTA CCGGGTGCAG
GTCGGGCTAT CGGATCTGGA CGCGCCCAAG AGCGCTACAT TGACCGGCAA GGCCGGCGGC
GCGCTTGGCA CCGGCGAGGG GTCGGGCCGG GTCACGCTGA CACCGGACGG ATCGGGCGGC
ACGGTGATCG GCTACAGCTA CGAGGCCGCC GTGGGCGGCA AGGTCGCATC CGTCGGTGGG
CGGCTGCTGG ACGGTGCTGC GAAAATCGTC ATTGGCCAGT TTTTTGCCGC CCTCGGACGC
AGGGCCGGAG ACGCACCACA GCCCGACGGC ATGATCGCCC GCATTCGCGG CTGGATCGGG
GGGACGCGAT GA
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| Protein sequence | MPKDGLHQTM LRVEDAPLLT GRGQFFDDLP TPHGTLQAAI LRSPYAHARI TDISADAARR
LAGVHAVLTG EDYASVASPL MVGVKLPIEC WPIARDKVRY VGEPVAVVLA DDRYLAEDAL
DLIEVSYDTL APVIDPLKAL ADDAPVLHDE MGGNLGADRR FSYGDPDSAF AEADHVVEIS
VRYPRNSCTP IETYGVLTRW NPHTRSYDVT SNFQGPFSIH PVVARALNVP GNRLRLRTPE
DSGGSFGIKQ GVFPYIALLS ACARLADRPV KWVEDRLEHL TASVSATNRA ITLRAAVTAK
GRVTALDYDQ VEDVGAYLRA PEPATLYRMH GNLCGAYDIA NLRVRNRIVM TNKTPTGLNR
GFGGPQIYFA LERLMQRIAI ELGLDPVNVA RDNLIPKGAF PYRTASGATY DSGDYQNAFD
TALKDGRYDA LCQKRDAARA EGRLYGIGLA VAVEPSVSNM GYLSTALTPA ERAKAGPKNG
AQSCATIAID PVGSITVQID SVPQGQGHKT VAASIVAERF GLEPGAITVV AAMDTGKDAW
SIAAGNYSSR FAAASAGAVR IAADRLRERI AAIAASQLNA RPEDIEFENG KVFIASNPGA
ALVFARVAST GHWAPGTLPD GIAAPMRETA IWTAPELTAP TDEDGINSSL CHAFIFDFCG
VEIDPVTHEA RVDHYVTMHD CGTILHEGMV EGQIRGAFAQ AVGAALYEEY VYDDDGAFLA
GTLADYPVPT VHEIPDLEIL HTCTPSPLTP LGAKGVGEGN CMSTPVCIAN AVADALAPAR
GNVDVTLPLS PARIASYLPD EPTAPEGIAQ PRPSSGKGLS GQGEARVGAA PQEIWDLLMD
ADQLAAIIPG AHGVKRLSPT RFLADVTLGV GPVKGRYRVQ VGLSDLDAPK SATLTGKAGG
ALGTGEGSGR VTLTPDGSGG TVIGYSYEAA VGGKVASVGG RLLDGAAKIV IGQFFAALGR
RAGDAPQPDG MIARIRGWIG GTR
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