| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3716 |
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| Symbol | |
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| ID | 5714245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 120678 |
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| End bp | 122087 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641276632 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001541928 |
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| Protein GI | 159046256 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAA AACCGACTGC GCCGGGCTCC CGCCGGGACA TGGATCTGCG GCAATGGCTC
GGCCATCTGG AAACCACCGA CCGGCTTGCC GTGACAAAAA CCGGCCGAAA GCTGGCCTTT
GAAATCGCGG GTCTGGCCAA CCGGCATGAC GGCAGCCGCG CCCTTGTCGC CCCTGCCCCC
GATGGTCATG CCGGCGGGGT CGTCATATCC GGCCTGCTGT CGCGCCGCGA ATGGATGGCC
GAGGCGCTTG GGGTCGAGCC CGGCACGTTG CTGTCGGCCT TCGAGGAAGC GGCGCAGTCG
CCATTGCCCG TGAACGAGGT AAAGACCGCA CCATGTCAGG AGGTCGTGCA CAAGCACGAC
ATCGACCTGA CCGCGATGCT GCCCATTCCG ACCCATAACG AACATGACAG CGGTGCCTAT
ATCACCGCCG GCCTGATGAT CTGCCGCAAC CCGCGCACCG GCATCCAGAA CGTCGCCATC
CACCGCCTTC AGGTCTCCGG CCCGCGCGAG TTGGGCGCGC TGCTGCTGCC GCGGCACACG
TTGAGTTTCT TTACCACCGC CGAGGAAGCG GGCGATGATC TGGAGGTCGC GATCGTCATC
GGCGCATCGC CGGCCTGTCT GTTGGCGTCG CAGGCCATCG TGCCGATGGA TTTCGACGAG
TTGACCGTCG CCGGTGCGCT TGGCGGTGCG CCGCTAGATG TGGTGCGCGG TATTTCGGTC
GACCTGTTCG TGCCCGCGCA AAGCGAGATC GTGATCGAAG GACGCTGCCG CGCCAACCTG
CGCCGCCCCG AAGGCCCCTT TGGGGAATTT CCGCAATATT ACGGCGAACG CGCCGACCGT
CATGTGATCG AGGTGAGCTG TGTGACCACA CGGCAAAAGC CGCTGTTCCA CACCATCGTC
GGCGGCGGGC TGGAACACCT GATCCTGGGC GGTATCCCCC GCGAGGCAAC GATCCTGAAA
ACCCTTCAGG ACATGTTCTC CTGCGTGCGC GACGTTCACC TCGCCCCCGG CGGGACGTGC
CGCTATCACC TTTACGTCAA GATCAAGGCC CGCCACGCGG GCGAGGCTAA GAATGTCCTT
CTGGGTGCGT TCGCCGCTCA TTACGACATC AAGCATGCGA TCGTCGTCGA CGAGGATGTC
GATATCCATG ACCCCGAAAT GGTCGAATGG GCGGTGGCCA CCCGGTTCCA GGCGGACCGC
GATCTTGTTG TCATATCAGG TTCCCAGGGC TCCAAGCTGG ACCCGTCCTC CGACAATGGT
TTCGGGGCCA AGATGGGGCT GGATGCCACG GTGCCGCTCG ACGCACCTGA ATTCCGGTTC
AAGCGGATTC GCGTGCCGGG CGAACAGGAG CTTGATCTGG ACGCGGTGAT CGACCCTGAC
GCCAAGCTCG CATCCCTACT CGGATCCTGA
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| Protein sequence | MSRKPTAPGS RRDMDLRQWL GHLETTDRLA VTKTGRKLAF EIAGLANRHD GSRALVAPAP
DGHAGGVVIS GLLSRREWMA EALGVEPGTL LSAFEEAAQS PLPVNEVKTA PCQEVVHKHD
IDLTAMLPIP THNEHDSGAY ITAGLMICRN PRTGIQNVAI HRLQVSGPRE LGALLLPRHT
LSFFTTAEEA GDDLEVAIVI GASPACLLAS QAIVPMDFDE LTVAGALGGA PLDVVRGISV
DLFVPAQSEI VIEGRCRANL RRPEGPFGEF PQYYGERADR HVIEVSCVTT RQKPLFHTIV
GGGLEHLILG GIPREATILK TLQDMFSCVR DVHLAPGGTC RYHLYVKIKA RHAGEAKNVL
LGAFAAHYDI KHAIVVDEDV DIHDPEMVEW AVATRFQADR DLVVISGSQG SKLDPSSDNG
FGAKMGLDAT VPLDAPEFRF KRIRVPGEQE LDLDAVIDPD AKLASLLGS
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