Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3715 |
Symbol | |
ID | 5714244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 119636 |
End bp | 120550 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641276631 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001541927 |
Protein GI | 159046255 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.782463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGA GACAGATGCA GTATCTGCTG GCGATCTACG AAGAAGGGTC GCTGACCGGG GCGTCGCGAC GGCTGAATGT CGTGCAACCG GCACTCAGCC AGCAGCTTCA GAAGCTGGAG GCGGAGATCG GGCAGCCGCT GTTTACCCGC GCACCCAAGG GCATGATCCC GACCCAGGCG GGTATTGAGG CCTATGAACA TTTTGTCAGG ATCACCCGCG ATCTCGATAC CGCCCTGAAT GCGCTATCGG GCGACGGCGG GCCGGTGCGC GGTACGGTTT CCATCGGGGT GGTCAGTTCC GCCGCCAACA ACGCGCTTGG CGAAACCCTG CAGAAATTCA CCGTGAAGTA CCCGGATGTC AGCGTGAAGG TGACGGGCGG CTATACCGGA GAGCTTCAGG ACCAGTTGCG CATGTCGCGG ATCGACCTGG CGATCATCAA CATGCCGCCG CTCAAACAGG ATCCGCGCAT CGTGGACATC GTCAAGGAGG ATTTCTGCCT GATCGCCGCG CCGGATACGC CGATCACTGG CAAGGCGGGA CTGCGGCTTG AGGATATCGA AACGATGAAA CTGGTGATCC CGTCGCAGCG GCATGGCCTG CGCACGATCA TCGACCGGGC CGCGAATGGC GAGGGGCTGG CATTGTCCCC GTCCATGGAA TTCGACGAGA TGAAGCTGAT CGAGGATTTC GTCTGCGCGA CCGACTACGT CACGATCCTG CCGCCCATCG CGGTCAATCG GGCCCTCAGG TCCGGACGTC TCAAGGCCTA TCCGATCCGG CCCGCGATCT CGCGGCGGCT TGTCTACCAG ATCAATCCCA GCCGACCGCT GAGCGCGGCG GCCCAGATCC TGATCGACGA GATCCGCGAG GACATCATCG AGTTCTCATA TTCCCTCGGC AATCTCGTGG GCTGA
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Protein sequence | MELRQMQYLL AIYEEGSLTG ASRRLNVVQP ALSQQLQKLE AEIGQPLFTR APKGMIPTQA GIEAYEHFVR ITRDLDTALN ALSGDGGPVR GTVSIGVVSS AANNALGETL QKFTVKYPDV SVKVTGGYTG ELQDQLRMSR IDLAIINMPP LKQDPRIVDI VKEDFCLIAA PDTPITGKAG LRLEDIETMK LVIPSQRHGL RTIIDRAANG EGLALSPSME FDEMKLIEDF VCATDYVTIL PPIAVNRALR SGRLKAYPIR PAISRRLVYQ INPSRPLSAA AQILIDEIRE DIIEFSYSLG NLVG
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