Gene Dshi_3687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3687 
Symbol 
ID5714217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp91376 
End bp91969 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content56% 
IMG OID641276605 
Productcobalt transport protein 
Protein accessionYP_001541901 
Protein GI159046229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTAG ACCTATATGT GTTCGGGAAC AGCCCGCTTC ATCGACTATC TCCGGGCTAT 
AAAATCCTGG CGCTTGTGCT CTTCTGCACC CTTCTGTTCG TTTTGCCGGG ATGGGTGCCC
TTGGTTGGGG GTGCGATTCT GGTCGCCATA GGTTGCTGGC TGGCTGGAAT CGGGTTTTCA
CATGCCTATC AGGCGATACG TCCTGCCTTG TGGATTCTTG CCGTTATTTT TATCGCGCAA
GTTATTCTCA CGGGGCTCGA ACTCGCTGCT TTCGTTGTCG TGCGCTTTGG AATCCTAATT
ATCGCGGCGT CGGTCATCAC CATGACGACG AAAACAAGTG AGTTTGTTGA CGGCATTCAA
GCAGGGCTCA GACATGCTCC GTCTTGGGTG CCGGCCGATC ATATCGCCCT CGCAATATCC
CTTGCGCTCC GCTTCATCCC ACTGGTGCGC ACAACGCTGG ACGAGGTGCG CATGGCGCAG
AAGGCCCGGG GCCTTGATCG CAGCGTGAAG GCTCTCCTTG TCCCCTTGGT CGTCCGAACA
TTAAAGACCG GCGATGAAAT CGCCGAGGCA ATCCAGGCGC GGTCGCCGCT TTAG
 
Protein sequence
MIVDLYVFGN SPLHRLSPGY KILALVLFCT LLFVLPGWVP LVGGAILVAI GCWLAGIGFS 
HAYQAIRPAL WILAVIFIAQ VILTGLELAA FVVVRFGILI IAASVITMTT KTSEFVDGIQ
AGLRHAPSWV PADHIALAIS LALRFIPLVR TTLDEVRMAQ KARGLDRSVK ALLVPLVVRT
LKTGDEIAEA IQARSPL