Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3668 |
Symbol | |
ID | 5714198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 69101 |
End bp | 69835 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641276586 |
Product | hypothetical protein |
Protein accession | YP_001541882 |
Protein GI | 159046210 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.16725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000130091 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAAAAAA CTGTTCAACC ACGCGACTAT GTATCTCCCG AAGGGCTTCA GTACGATGTC GGATTGCGCA AGTACCTGAC AGGCGTATTT GCCTATATGG GCGGCGGGCT GGTGCTATCG GCACTGGTGG CCTTTGCTGT GGCAAATGTT GCGCCTGTCA CGGCGCTCAT CTTTGGAACA CCTCTCAAGT GGGTCGCAAT CTTCGCGCCA CTGGCGTTGG TGATGTTCGC GTCTTTCCGT TTTGAGCGAC TTTCCGTAGG TGCTCTGCAA GGTCTCTTCT GGGGATTCGC GGCCCTCATG GGCGTGTCGC TCGCCAGCGC GCTGCTGGTT TTCACAGGCA CAAGCATCGT TCAGGCATTC CTGAGCGCGT CCATCATTTT TCTGACAATG GCGCTGTGGG GCTACACGAC GAAACGCGAT CTGTCCGGGT GGGGCAGTTT CCTGATGATC GGCCTGATCG GCGTCATCGG TGCCTCTATC GTCAACCTGT TCCTAGCATC GGGTGCACTG GCAATGGCCG TCTCTGTGAT CGGGGTGATT GTCTTTACCG GCCTCACAGC ATCGGACATG CAACGCCTGC GGAACGAGTA CCTGGCACAT TGTGAGCAAG GTGGCGTCGC TACCCAAGCA AACCTCGGCA AACTTCAGAT AATGGGGGCG CTCTCCCTTT ATCTCAATCT CATCAACCTG TTTCAAATGC TGCTGAGCTT GTTCGGCCAG CGGCAGGAAG GATAA
|
Protein sequence | MEKTVQPRDY VSPEGLQYDV GLRKYLTGVF AYMGGGLVLS ALVAFAVANV APVTALIFGT PLKWVAIFAP LALVMFASFR FERLSVGALQ GLFWGFAALM GVSLASALLV FTGTSIVQAF LSASIIFLTM ALWGYTTKRD LSGWGSFLMI GLIGVIGASI VNLFLASGAL AMAVSVIGVI VFTGLTASDM QRLRNEYLAH CEQGGVATQA NLGKLQIMGA LSLYLNLINL FQMLLSLFGQ RQEG
|
| |