Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3652 |
Symbol | |
ID | 5714182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 50623 |
End bp | 51540 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641276570 |
Product | hypothetical protein |
Protein accession | YP_001541866 |
Protein GI | 159046194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00179272 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGCGCA AAGTCACACC TTCGCAATTT CGCAGTCAAC TGCGCCAAGC GCAGTCGAAA TACAATCAGG CTGTCAACCG TTACAATTCT GCCGTTCGTG CGCATAATCA GAAGGTCCGC ACGGTCGTGA ACGAGTATAA CCAAGCCGTC AGCCGCTATA ATTCTTCGGC GCGGGCACAC AACACCCGTG TGCAGCAGAA CCGCGCGAAG CTACAGAGGG AGTTGGCAAA GCTGTCAAGC TCCACCAGCC AACCGCGCTA CGTCACCCTG CGTAGCTCGA TGAATACCGT TCAGCACTCC TACTCGCGCC TTGAGGCGCG TGCGGATGCC GGCGCCTACT CTGAAAACTA CGACACTATT CTTGATCTGT CGGAGCGTGA GGCGACGAAC AGCGCCAGTG TCATGAATGC CCTGCTCGAC AATCCGAGCG ATCCGGAAGG GCAGGACGAA CTGCAGGACA GCGAGCTTGA TCCGATCCTG AAACAGCTAT CTGGTGATGC GCTGGATCGC TGGCACGGCG CGCTGTTTTC ACTGAATCCG CGCAACCCTG ATGCCGCGCG GCATTTCTGC ACCAGCGCCC GTGAGCTACT TACCACCATT CTGGACAGCT TCGCGCCTAA CCAGAAGGTG CTGGAAGCCA TGCCCGACTG TGACACCATC CCTTCGGGAG CACCGTCACG CCGGGCGAAA ATCCGTTATT TCCTATACCA GAACGGCATG CAGGACGAGA CGCTGGAAGA GTTCGTGGAA GAAGATCTGG AGAATGTTGT CCAGCTCTTC CGGGTATTCA ACGATGGCAC CCACGGCTCT TCGGGCCGCT TCACCCATGC CCAGCTTCTG GCGATCCGAA AGCGCGTGGA GGGTGCCATT ACCTTCCTTT GGAATATCAT CCCGCAGACA CTGCAGATGG CGGCCTGA
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Protein sequence | MVRKVTPSQF RSQLRQAQSK YNQAVNRYNS AVRAHNQKVR TVVNEYNQAV SRYNSSARAH NTRVQQNRAK LQRELAKLSS STSQPRYVTL RSSMNTVQHS YSRLEARADA GAYSENYDTI LDLSEREATN SASVMNALLD NPSDPEGQDE LQDSELDPIL KQLSGDALDR WHGALFSLNP RNPDAARHFC TSARELLTTI LDSFAPNQKV LEAMPDCDTI PSGAPSRRAK IRYFLYQNGM QDETLEEFVE EDLENVVQLF RVFNDGTHGS SGRFTHAQLL AIRKRVEGAI TFLWNIIPQT LQMAA
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