Gene Dshi_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3599 
Symbol 
ID5714129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand- 
Start bp4404 
End bp4961 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content56% 
IMG OID641276517 
Productputative lipoprotein 
Protein accessionYP_001541813 
Protein GI159046141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.249896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.187843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG ATGCTTCAGC CGAAGTCATC AGTAGCGCAT CCTACCGTCA CGATGGACCG 
GCCGCGCTGA CGTTGTACAC CATGATCAAC AACAGGTCCG GGGCGGGTGC GCATAGCAGC 
GTCATGATTA ATGGGTCGCA GCGTGTTATC TTCGATCCGG CAGGAACGGT CCGGCTGAGC 
GCTGTACCGG AACGGGGAGA TGTGCTTTAT GGCATTACTC CACAAGTGGC CGATTTTTAT 
GCGCGGGCTC ATGCTCGCGA GACCTACCAT GTCGTCATAC AAGAGATCGA TGTGTCTCCC 
GAAGTCGCGG AGCAGGCTTT GCGCCTTGCA ATTGCCAGCG GCCCAGCCGC TTCCGGTTTT 
TGTAGTGCCA GTACCTCCGC GGTACTCAGA CAATTACCAG GATTTGAATC CATCGGACGC 
ACATTTTTTC CAAAGCGCCT GATGGCGGAT TTTGGCAAGT TGCCGGGCGT GCGAACCACA 
AAGCTGTTCG AGAACGATGA GGACGACAAA TCCGTAGCGA TCGCACAGTT CGAAAGTTCA 
CTTGCGACAC AGCCGTGA
 
Protein sequence
MRPDASAEVI SSASYRHDGP AALTLYTMIN NRSGAGAHSS VMINGSQRVI FDPAGTVRLS 
AVPERGDVLY GITPQVADFY ARAHARETYH VVIQEIDVSP EVAEQALRLA IASGPAASGF 
CSASTSAVLR QLPGFESIGR TFFPKRLMAD FGKLPGVRTT KLFENDEDDK SVAIAQFESS 
LATQP