Gene Dshi_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3577 
SymbolgalU 
ID5713808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3767288 
End bp3768184 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID641269506 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001534911 
Protein GI159046117 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.125314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCTC GTAGTGTCAA AACCGCTGTC TTTCCCGTTG CTGGTATGGG CACGCGATTT 
TTGCCAGCCA CCAAGTCGGT GCCGAAAGAA ATCATGACCC TGGTGGATCG TCCGCTCGTC
CAGTATGCGA TCGACGAAGC GCGGGCGGCG GGGATCGAGG AGTTCATCTT CGTCACGTCG
CGCGGCAAGA GCGCGCTCGA GGATTACTTT GACGCCGCCC CTCAACTCGA ACAAACGCTC
GAGGATAAGG GCAAGACCAA GCTGCTGGAG ATCCTGCGCA ACACCAACAT GGACAGCGGC
GCCATCGCCT ATGTGCGGCA GACCCGCGCG CTGGGCCTCG GTCATGCGGT CTGGTGCGCG
CGGCGACTGC TGGGCAACGA GCCCTTCGCC GTGATCCTGC CTGACGACGT GATCGCCGCC
GAAAAACCCT GCCTCGCGCA GATGGTCGAG GCTTACCAGG AGCTTGGCGG CAACATGGTT
GCGACCATGG AAGTGCCCAT GGACAAGGCG TCGGCCTATG GCATCGTCGA TGTCGAAGAG
GACATGGGCA GCGTGGTGCG GGTCAAGGGC ATGATCGAGA AACCCAAGGC TGAAGACGCG
CCCTCGAACC TGGCGGTGAT CGGGCGGTAC ATTCTCAGCC CGGAGGTTCT CGACAACCTC
GACAAGGGCC AGATCGGCGC CGGGGGCGAG ATCCAGCTGA CCGATGCCAT TGCGCAGGAA
ATCACCAGCA AGAACAATGT CTACGGCTTC CGCTTTTCGG GCCAGCGGTA TGACTGCGGC
TCCAAGGCCG GGTTTCTGCA GGCGACGGTG TCCTTCGCCC TGGCGCGCCC GGATCTGCGC
GACGAGCTGT CGGATTTCCT GCAGGAGCTG GCCTTCGCGC GCAAAGCGGC CGAGTAA
 
Protein sequence
MMSRSVKTAV FPVAGMGTRF LPATKSVPKE IMTLVDRPLV QYAIDEARAA GIEEFIFVTS 
RGKSALEDYF DAAPQLEQTL EDKGKTKLLE ILRNTNMDSG AIAYVRQTRA LGLGHAVWCA
RRLLGNEPFA VILPDDVIAA EKPCLAQMVE AYQELGGNMV ATMEVPMDKA SAYGIVDVEE
DMGSVVRVKG MIEKPKAEDA PSNLAVIGRY ILSPEVLDNL DKGQIGAGGE IQLTDAIAQE
ITSKNNVYGF RFSGQRYDCG SKAGFLQATV SFALARPDLR DELSDFLQEL AFARKAAE