Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3571 |
Symbol | dnaK |
ID | 5713802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3760594 |
End bp | 3762513 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641269500 |
Product | molecular chaperone DnaK |
Protein accession | YP_001534905 |
Protein GI | 159046111 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAG TCATTGGTAT CGACCTCGGC ACCACGAACT CGTGCGTTGC CATCATGGAC GGCTCGCAAC CGCGGGTCAT CGAAAACTCC GAAGGGGCGC GGACCACGCC CTCCATCGTC GGCTACACGG ACGACGAACG GCTCGTGGGC CAGCCGGCCA AGCGCCAGGC GGTCACCAAC CCGGAAAACA CCGTCTTTGG CGTCAAGCGC CTGATCGGGC GTCGGTTCGA CGATGCAGAT CTGGAAAAAG ACAAGAAGAA CCTGCCCTAC GCCGTGGTGA ACGGCGGAAA CGGCGACGCC TGGGTCAGCG TGAAAGGCGA GAATTTCTCC CCCGCGCAGG TCTCGGCCCT CATCCTCAAG AAGATGAAGG AAACCGCCGA AAGCTATCTC GGCGAGGATG TCACCCAGGC GGTCATCACC GTCCCGGCCT ATTTCAACGA CGCCCAGCGC CAAGCGACCA AGGACGCGGG CAAGATCGCC GGCCTCGACG TGCTGCGCAT CATCAACGAG CCGACCGCGG CGGCGCTCGC CTACGGCCTC GACAAGTCCG ACACCCAGAC GATCGCGGTC TATGACCTCG GCGGCGGTAC GTTCGACATC ACGATCCTGG AAATCGACGA CGGCCTGTTC GAAGTGAAAT CCACCAACGG GGACACCTTC CTCGGCGGGG AAGACTTCGA CATGCGGATC GTCAATTACC TGGCCGACGA GTTCAAGAAA GAACATGGCG TCGACCTGAC CAAGGACAAG ATGGCCCTGC AGCGCCTGAA GGAAGCCGCC GAGAAGGCCA AGATCGAGCT GAGCTCCTCG ACCCAGACCG AGATCAACCA GCCGTTCATC TCGATGGACC CCAATGGCGG CCAGCCTTTG CACATGGTGA TGAAGCTCAC CCGCGCGAAG CTGGAAAGCC TGGTGGCCGA CCTGATCAAG GCCTCGCTGA AGCCGTGCAA GGACGCTCTG AAGGATGCCG GGCTCAGCAC CTCGGACATC GACGAGGTGG TTCTGGTCGG CGGCATGACG CGGATGCCGC GGGTCACCGA GGAAGTGTCG AAGTTCTTCG GCAAGGAGCC GCACAAGGGC GTGAACCCCG ATGAGGTCGT CGCAATGGGC GCTGCGATCC AGGCCGGTGT TCTGCAAGGC GACGTCAAGG ACGTGGTTCT GCTGGACGTG ACGCCCCTGT CCCTGGGTAT CGAGACCCTG GGCGGCGTGT TCACGCGTCT CATTGACCGC AACACGACCA TCCCGACCAA GAAGTCCCAG GTCTTCTCCA CCGCCGAGGA CAACCAGAAC GCCGTGACGA TCCGCGTGTT CCAGGGCGAG CGCGAGATGG CGGCCGACAA CAAGATGCTC GGCCAGTTCA ACCTTGAAGA CATCCCGCCC GCCCCGCGGG GGATGCCGCA GATCGAGGTG ACCTTCGACA TCGACGCCAA CGGCATCGTC TCCGTGTCGG CCAAGGACAA GGGCACCGGC AAGGAGCAGA AGATCACGAT CCAGGCGTCC GGCGGTCTGT CCGACGAGGA GATCGATCAG ATGGTGCGCG ACGCCGAGGC CAATGCCGAC GCCGACAAGC AGCGCAAGGA ACTGGTCGAG ACCAAGAACC AGGCCGAGAG CCTCGTGCAT TCGACGGAGA AGTCCCTCGA AGAGCATGGC GACAAGGTCG ATCCCTCGAC CGTCGAGGCG ATCGAACTGG CGGTCTCCGC GCTCAAGGAA ACGCTGGAAG GCGACGATGT GGGCAAGATC AAGTCCGGCA TCCAAAACGT CACCGACGCG GCCATGAAGC TCGGCGAGGC GATCTACAAG TCGCAGCAGG AAGCCGCGGG GGAAGAAGCC CCCGAGGCGG ATGGCGACAA GGCACGCGAG GTCGACGACG ACATCGTGGA CGCCGATTTC GAAGACCTGG ACGACCGGAA GCAGGGCTGA
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Protein sequence | MGKVIGIDLG TTNSCVAIMD GSQPRVIENS EGARTTPSIV GYTDDERLVG QPAKRQAVTN PENTVFGVKR LIGRRFDDAD LEKDKKNLPY AVVNGGNGDA WVSVKGENFS PAQVSALILK KMKETAESYL GEDVTQAVIT VPAYFNDAQR QATKDAGKIA GLDVLRIINE PTAAALAYGL DKSDTQTIAV YDLGGGTFDI TILEIDDGLF EVKSTNGDTF LGGEDFDMRI VNYLADEFKK EHGVDLTKDK MALQRLKEAA EKAKIELSSS TQTEINQPFI SMDPNGGQPL HMVMKLTRAK LESLVADLIK ASLKPCKDAL KDAGLSTSDI DEVVLVGGMT RMPRVTEEVS KFFGKEPHKG VNPDEVVAMG AAIQAGVLQG DVKDVVLLDV TPLSLGIETL GGVFTRLIDR NTTIPTKKSQ VFSTAEDNQN AVTIRVFQGE REMAADNKML GQFNLEDIPP APRGMPQIEV TFDIDANGIV SVSAKDKGTG KEQKITIQAS GGLSDEEIDQ MVRDAEANAD ADKQRKELVE TKNQAESLVH STEKSLEEHG DKVDPSTVEA IELAVSALKE TLEGDDVGKI KSGIQNVTDA AMKLGEAIYK SQQEAAGEEA PEADGDKARE VDDDIVDADF EDLDDRKQG
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