Gene Dshi_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3560 
Symbol 
ID5713791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3745860 
End bp3746450 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content64% 
IMG OID641269489 
Producthypothetical protein 
Protein accessionYP_001534894 
Protein GI159046100 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGACC TGATCGCGAA AACCACCCTC GACCAGCGTA TCGCCGCCCT CGTCACCCCG 
GTGATCGAGG ATCTGGGCTA TGAGCTGGTG CGGCTGCGGG TGATGAGCGG CAAGTCCCCG
ACCCTGCAGA TCATGGCCGA GAAGCCCGAG GGCGGGATCG AGGTGGACGA TTGCGCGCGG
ATCTCGACCG AGGTGTCGGC CACGCTCGAT GTCGAGGACC CGATCGAGGA CAACTACACG
CTCGAAGTGT CCTCCCCCGG CATCGACCGG CCCCTGACCC GGCTCAAGGA TTTCGACACC
TGGGTGGGCT ACGAGGCGAA GATCGAGACC ACCGAGTTGA TCGAGGGCCG CCGCCGGTTC
AAGGGCGCGC TGGCCGGGAC CGAGGGCGAC GAGGTGCTGA TCGAGATCGA GGAAGGCACC
ATCGGGCTGA AATTCGAGTG GCTCAGCGAC GCCAAGCTCG TGTTGACCGA CGACCTGATC
CGGGATGTCC TGAAAGGCCG CAAGGATGCG GGCCAGGTGG ACGAAGCCCA GTTCGACGAA
ATCCAGACCA TCATCGACGG CGATGATGAA CCACCCGCGA ATACCGCGTA A
 
Protein sequence
MSDLIAKTTL DQRIAALVTP VIEDLGYELV RLRVMSGKSP TLQIMAEKPE GGIEVDDCAR 
ISTEVSATLD VEDPIEDNYT LEVSSPGIDR PLTRLKDFDT WVGYEAKIET TELIEGRRRF
KGALAGTEGD EVLIEIEEGT IGLKFEWLSD AKLVLTDDLI RDVLKGRKDA GQVDEAQFDE
IQTIIDGDDE PPANTA